Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02493 ATGGCGGAAACAAAATTGATTCCAGGGTTTCGATTTCATCCCACTGACGTTGAGCTGGTTATGTATTTTCTGAAGAGGAAGGTTATGGGTAGAAAATTCCCTTATGATGTCATTGCTGAACTTGACATTTACAAGTATGCTCCATGGGATCTACCAGATAAATCTTTGCTCAAAAGTGGAGATTTGAAATGGTACTTTTTTAGTCCTACAGGAAAGAAATATTCCACTGGAGGGAGGATGAATCGGGCGACAGAAATTGGGTACTGGAAGACTACTGGAAAGGATAGATCAATTGAACATAAGAATCAAGTCGTGGGGATGATAAGAACATTGGTGTTTCACACTGGCAAATCCCATAAAGGAGACCGAACCGACTGGGTTATGCATGAATTCAGACTTGAAGACAAGTACCTAACTGACAAAGGCATTCCACAGAATTCCTATGTGATTTGTAGGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAGTATGGAAAACCATTTAATGAGAAAGACTGGGACAGTGAAGAGGAAGTTGATTGTCCTCAACCTGTCCCTGTTGCTGCTGTCTCTGCACCAGCCCCCATTCTACCTAGCTCATGCCATATCTCTGTAGCAAATGACATGCATCCCACGACAAGTGGATGCATTGGACTGGCCTCTTCATCATATCTATCAAGGGTGATGCCCTCTGGCGTGACACACCCTTCAGCTCCAAGCAATCAAGTTGATGATGACATTTTATCCATGCTTGCTAGTTTCAAAGATGATAACGATACATCAGCCAAGAATGAAAACAATGGATCTGAGAAGGTAGATAATTCTGGTCAGGCAAACAATGCTGAAGGTGCACCATATTTAGATCCAAATGAGATTTTCGAGAGCTTGGGAGATCTTGACAGCTTGATTGGATTGGATGAAGGAGACGGCTTTTCATATGGCCAAAAAGATGAATATACTAAAAACGAAATGCCTTCTACTAGCAATGTATCTTTGTTTTGCGACCCTCAACACGATTTCTTGGAGTTGACTGACCTAGAGGCGCCATTGTTCTAG 1065 0.4244 MAETKLIPGFRFHPTDVELVMYFLKRKVMGRKFPYDVIAELDIYKYAPWDLPDKSLLKSGDLKWYFFSPTGKKYSTGGRMNRATEIGYWKTTGKDRSIEHKNQVVGMIRTLVFHTGKSHKGDRTDWVMHEFRLEDKYLTDKGIPQNSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDSEEEVDCPQPVPVAAVSAPAPILPSSCHISVANDMHPTTSGCIGLASSSYLSRVMPSGVTHPSAPSNQVDDDILSMLASFKDDNDTSAKNENNGSEKVDNSGQANNAEGAPYLDPNEIFESLGDLDSLIGLDEGDGFSYGQKDEYTKNEMPSTSNVSLFCDPQHDFLELTDLEAPLF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02493 354 PANTHER PLANT NAC DOMAIN PROTEIN 1 237 - -
Car05g02493 354 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Car05g02493 354 MobiDBLite consensus disorder prediction 270 284 - -
Car05g02493 354 MobiDBLite consensus disorder prediction 260 292 - -
Car05g02493 354 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Car05g02493 354 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Car05g02493 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 237 - -
Car05g02493 354 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02493 Car-Chr5 70065340 70068659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02493 1 353 NAC Transcription Factor Family AT5G09330 43.583 5.86e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car05g02493 NAM 1.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02493 - - adu:107470479 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00691 06 6924880 6927635 Car05g02493 05 70065340 70068659 PCT