Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02489 ATGGAGCATGGAAAATTTGTTGTTAGCAGCATGGTAAAGGCTCAAAGCAAAGAGAGGCTTGCCATTTTAGAAGTTGCACACATGATGAGTGTGCCTATGTCACTCGTTGCTGTTCTCAATATGAAGGTACCTGATGCCATCTGGCAAGGTGGCAATAACACTCCACTCTCCGCTTCTGAGATACTCGCCGTTGTTCGTCCCAACGGCGGTGGAGATGCGGAGAATCTTCAACGCATCCTCCGGTTGTTGACCACCTATGATATTTTTGATGAGCAGTTGAATAGCAAAGGTGAGAGGAAGTATTCTCTGAGTGATGTTGGTAAAACTCTTATTGCAGATGCTGATGGTTTATCCTATGCAGCATACGTGCTCCAACACCATCAGGAGGCGTTGATGCGAGCATGGGCGTTGGTGGGAGAGGCGGTGGAGGATCCAACGGTGGAGCCGTTCGAGAAGGCGAACGGAGAATCGGCAGTAGCATATTACATAAAGAGAGCAGATGTAATGAGTTTGATATACAGTTCATTGGCTGGGATGTCAGTGCCTTTCATGAGGGAAATGTTGGAGAATTATGATGGATTTCAAGGTGTGGAGACTCTAGCTGATGTTGGTGGTAATTCTGGTGTGTGTCTTAACATGATTATGAACAAATATCCTAACATACGCAAGGGCATTAATTATGATTTTCCTGCTATGGTATCTTCTGCGCCGGAATTTCCAGATATAACCCACATCGGTGGTGATGCGCTTCAGTCAGTACCTGCTGGGGATGCTATCTTCATGAAGTGGATATTCTTAGCATGGACAGATGAGGAATGCAAGAAGACCTTGCAGAACTGTTACAAGGCTCTTCCGGTGGACGGAAAATTGATCGTTTGTGAACCGGTGCTGCCGGAGCTGACCGATGAGAGTCAAAGAACAAGAGCATTGTTGGGGGGTGACATATTCATAATGACAATGTACAGAACCAAGGGAAAACACAGAACAGAGGAACAATTTAAACAACTTGGTGCTTCTACTGGTTTTTTTCGTTTTCGTGCCTTCTATATTGATCCTTATTTGGCCGTGCTCGAATTTCAGAAATGA 1086 0.4521 MEHGKFVVSSMVKAQSKERLAILEVAHMMSVPMSLVAVLNMKVPDAIWQGGNNTPLSASEILAVVRPNGGGDAENLQRILRLLTTYDIFDEQLNSKGERKYSLSDVGKTLIADADGLSYAAYVLQHHQEALMRAWALVGEAVEDPTVEPFEKANGESAVAYYIKRADVMSLIYSSLAGMSVPFMREMLENYDGFQGVETLADVGGNSGVCLNMIMNKYPNIRKGINYDFPAMVSSAPEFPDITHIGGDALQSVPAGDAIFMKWIFLAWTDEECKKTLQNCYKALPVDGKLIVCEPVLPELTDESQRTRALLGGDIFIMTMYRTKGKHRTEEQFKQLGASTGFFRFRAFYIDPYLAVLEFQK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02489 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Car05g02489 361 PIRSF O-mtase 3 361 IPR016461 GO:0008168
Car05g02489 361 Gene3D Vaccinia Virus protein VP39 117 361 IPR029063 -
Car05g02489 361 PANTHER OS02G0823400 PROTEIN 13 360 - -
Car05g02489 361 PANTHER O-METHYLTRANSFERASE 13 360 IPR016461 GO:0008168
Car05g02489 361 Gene3D - 8 116 IPR036388 -
Car05g02489 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 361 IPR016461 GO:0008168
Car05g02489 361 SUPERFAMILY "Winged helix" DNA-binding domain 17 113 IPR036390 -
Car05g02489 361 Pfam O-methyltransferase domain 135 342 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02489 Car-Chr5 70016176 70019752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02489 13 361 Monolignol Biosynthesis Gene Families AT3G53140 60.623 1.59e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02489 - - ccaj:109819366 501.516