Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02482 ATGCTCAAAACCTTCCTAGACGCTTCCACAGGAAACCGCTCCCGAACCACCGTCGCCAAGAGCTGCCTCCAAGTCTTCCAATACTCTCATCACCGTATATCTCTCACATCACATGCACTCTCACGTGGAAGAACCAAAGACGCACGTGCCTTCATGAGCGCTGCATTGGCTTATCAGTATAACTGCTGGTCCGGTCTCAAATACGCAAACGACACTTCACTCGTCTTCAAAACGATGTCGTTTCTTGAATCCCTCACCATCCTCTCCAGTAACGCTCTCGCCATGATTCTCAACTACGACCTCTTTGGAAACGACACCGCTTCATGGAGGCCGCCTCGCACCGAGCGTGACGGTTTTTGGGAGGGTTACGGCTCGGGTACATTCGGCTCTGGACCTTCCGTACCCGCGAATCTTACGCCGAATGTTACGGTGTGTAAGGAAGCGGGAAGTGGGTGTTATGAGACGGTGCAGGAAGCGGTTGATGCTGCGCCTGATGACGTGGATGTTGGAGGAGGGAAATTTGTGATACACATAAAGGAAGGGGTTTATGAAGAAAGGGTTAGGGTTCCGTTAAGGAAGAGGAACGTTGTGTTTTTGGGTGATGGTATTCGTAAAACTATCATCACCGGCTCTGCTAACGTGGGACTACAAGAGGGGATGACAACCTATAACTCTGCCACCGTAGGGGTTGTTGGGGATGGATTCATGGCAAAGGATCTCACTATCCAAAACACAGCAGGTGCTAATGCTCACCAAGCAGTGGCATTTAGATCAGACAGTGATCTTTCTGTTATCGAGAAATGTGAATTCATAGGAAATCAAGATACTCTCTATGCTCATTCCTTGCGTCAGTTTTATAAATCTTGTCGTATTATAGGCAATGTGGACTTCATCTTTGGAAACTCAGCTTCATTCTTCCAAGACTGCGAAATCCTAGTCCAGCCCAGGCAAGCAAGGCCAAAGAAAGGGGAGAACAATGCCATTACTGCACATGGCAGAACAGACCCTGCTCAGTCAACTGGCTTTGTTTTCCACAATTGCTTGGTTAATGGTACCGATAAATATATGGAATTGTATTATAGCAAGCCTAAAGTACACAAGAACTATCTAGGAAGGCCATGGAAGGAGTATTCTAGAACAATTTTCATTCATTCTTTCTTGGAAGCCCTTATCACACCACAGGGTTGGATGCCATGGAGTGGAGATTTTGGGCTGAATACACTGTACTATGGGGAATTCAAGAACACTGGACCTGGTTCTAATTTGACTAAGAGAGTGTCCTGGAGTAGCCAGTGCAGGGTTTCATTCAAGGAGATGACTGGGTTCATCATATCAGTTATTAGCTCATCATGGGATGTGAGATTTCAGAAATGCCATGGGGAGAACGGAATTCCAAATCCTGCATCAGATCAGTTTTGCTGGTAG 1425 0.4674 MLKTFLDASTGNRSRTTVAKSCLQVFQYSHHRISLTSHALSRGRTKDARAFMSAALAYQYNCWSGLKYANDTSLVFKTMSFLESLTILSSNALAMILNYDLFGNDTASWRPPRTERDGFWEGYGSGTFGSGPSVPANLTPNVTVCKEAGSGCYETVQEAVDAAPDDVDVGGGKFVIHIKEGVYEERVRVPLRKRNVVFLGDGIRKTIITGSANVGLQEGMTTYNSATVGVVGDGFMAKDLTIQNTAGANAHQAVAFRSDSDLSVIEKCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASFFQDCEILVQPRQARPKKGENNAITAHGRTDPAQSTGFVFHNCLVNGTDKYMELYYSKPKVHKNYLGRPWKEYSRTIFIHSFLEALITPQGWMPWSGDFGLNTLYYGEFKNTGPGSNLTKRVSWSSQCRVSFKEMTGFIISVISSSWDVRFQKCHGENGIPNPASDQFCW 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02482 474 PANTHER PECTINESTERASE 8 434 - -
Car05g02482 474 Gene3D - 135 454 IPR012334 -
Car05g02482 474 Pfam Pectinesterase 141 438 IPR000070 GO:0030599|GO:0042545
Car05g02482 474 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 96 IPR035513 -
Car05g02482 474 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 98 IPR035513 -
Car05g02482 474 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 8 434 - -
Car05g02482 474 Pfam Plant invertase/pectin methylesterase inhibitor 12 95 IPR006501 GO:0004857
Car05g02482 474 SUPERFAMILY Pectin lyase-like 140 440 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02482 Car-Chr5 69957926 69960250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02482 2 431 Carbohydrate Esterase AT5G09760 66.055 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02482 - - gmx:100802102 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00700 06 7014123 7017380 Car05g02482 05 69957926 69960250 PCT