Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02475 ATGAGAGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAATCTATCTTCACAATCACAATCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATAAATGGTCACCAAGGAGAAGTTAAGATTGGAGATCTGGGGCTGGCAACTCTCCTGAAGCATAAAAAGGCCAAGAGTGTAATAGGAACCCCGGAGTTTATGGCGCCTGAACTGTACGATGAAAATTATAATGAATTGGCCGACATATATTCTTTTGGGATGTGTATGCTAGAGTTGGCTACTTCTGAGTATCCTTACAGAGAATGTAGAAACTCTGCTCAGATATACAAGAAAGTTTCGTCAGGTATAATGCCAGTTTCTCTTTCTAAAGTCAAAGATCCAGAAATAAAATCATTTATCGAGAAGTGTCTGGTCCCAGCATCTCAAAGATTATCAGCAAAGGAGCTTCTGATGGACCCTTTTCTTGCAGTGAATGTTTCCATAAAGAATCGTCCTCTTCCATTACCAGATATCGTTCTTCCTAAATTTGGAGCCTTTGAAAATCGTTGTCTGATGTCAGAAGGTCCTGCTAGTGCACGAATTGGATCTATTTCAATGGATCTCGGTGATACTAATGGGAAACCATTGATCACTGTATTTTATAATTCTGTTGATGATGCACCACCTTTACCATGTGTTGAGATACGAAGGTTGATGGGAGGTGATAGATTTTTTCTCAAAGGTGAACAAAATGAAGAGAATTCTGTATCATTAGTTCTCCGGATAACTGATCAGGGCGGGCGAACAAGAAATATCCATTTCATATTCTACCTCGATAGTGATACAGCCATCTCAGTATCAAGTGAAATGGTTGAGCAACTCGAACTTGCCGAGCACAATGTTAAATTCATTGCCGAGTTGATTGATTTGTTATTGACAACATTGGTTCCTGATTGGAAACCTTGTGTAGCAATTGATCACTTAATTTCTCCAAATGGTAAACGAACTCATGTGACCCAACAGAAATACGACCCACAGTTGGCAAAATACAAACAAACTTCAGTAGATTCAACCCAAATTGTAGCTGAAGATGTAGGTCCCTCAACCTCACACGAAAAAGAAAACCATGATAGTGTGATTTTTTACGACGTTTTATCTCATGCAAGTATTGGCCTTCAAAGAACAAAGACAGAAGATTTGTATTCAGTGACATCATATACTTCAGCAACATCTGACTTCAATGATAAGAATTTATCAACAGTTTCATTCATGTCTGCAAAATCAGGATTCACAGACTGCACCTTACCTTCACTCAATGGAGGGAGTCAATCCTCGCTTGGATCTGAAATTCGAGCATCCTTTGATAAAAAGAGCAAGTTTCCAAGCATGGAAATCAACAACTATCCCCTAAGTACTTCCTCATATTATGAACGTGAGGATGATTTGAGAACAGAGTTAGAGAAGATAGAACGACAATATCAAGAGGCAATGAAAGATTTATCCAGAAGAAGATATGAGGCCATCGTAGAGACCAGAAAGAAGCTGTCACTAAAAAATACAATCATAGAATAA 1560 0.3827 MRAVKGWARQILMGLIYLHNHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKHKKAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELATSEYPYRECRNSAQIYKKVSSGIMPVSLSKVKDPEIKSFIEKCLVPASQRLSAKELLMDPFLAVNVSIKNRPLPLPDIVLPKFGAFENRCLMSEGPASARIGSISMDLGDTNGKPLITVFYNSVDDAPPLPCVEIRRLMGGDRFFLKGEQNEENSVSLVLRITDQGGRTRNIHFIFYLDSDTAISVSSEMVEQLELAEHNVKFIAELIDLLLTTLVPDWKPCVAIDHLISPNGKRTHVTQQKYDPQLAKYKQTSVDSTQIVAEDVGPSTSHEKENHDSVIFYDVLSHASIGLQRTKTEDLYSVTSYTSATSDFNDKNLSTVSFMSAKSGFTDCTLPSLNGGSQSSLGSEIRASFDKKSKFPSMEINNYPLSTSSYYEREDDLRTELEKIERQYQEAMKDLSRRRYEAIVETRKKLSLKNTIIE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02475 519 Coils Coil 475 502 - -
Car05g02475 519 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 1 515 - -
Car05g02475 519 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02475 519 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 252 305 IPR024678 GO:0004674|GO:0005524
Car05g02475 519 Gene3D - 250 341 - -
Car05g02475 519 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02475 519 SUPERFAMILY Protein kinase-like (PK-like) 4 159 IPR011009 -
Car05g02475 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Car05g02475 519 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
Car05g02475 519 Pfam Protein kinase domain 3 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02475 519 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02475 Car-Chr5 69848293 69851424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02475 1 327 MAP Kinase Kinase Kinase AT1G49160 69.113 3.28e-167 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car05g02475 Pkinase 3.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02475 K08867 - gmx:121175054 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00708 06 7099756 7103094 Car05g02475 05 69848293 69851424 PCT