Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02472 ATGGAATGTGAAGGCAAATTGGTGGGAATGGAAAAAGATGAATACAAGAAGAACAAGTACTCATACGTTTTAAAGTCCAAAATCGGAGAGGGTTCTTTCTCCACAGTGTGGATAGCTGAACAAACACCCACTCGTCAACATGTTGCAATCAAACAGGTGTTTCTCTCCAAACTCAACCCTCGCCTCAAAGCTTCTTTGGACTGCGAGATCCATTTTTTGTCCTCTGTTAACCATCCCAATATTGTTCATCTTCTTCACTTCTTCCAGGGTGATGATGAATGTGTTTACTTGGTCCTGGAGTTTTGTCCTGGAGGGAATCTCGCTTCTTATATTCGATCTCATGGAAGAATTCAACAACTAACCGCTAGAATGTTCATGCAACAGCTTGGCTCTGCTCTAAAACTACTACACTCTCATGGCATCATTCATAGAGATTTGAAACCCGAGAACATTTTGCTATCTAGCCATGGGGATGATGCAGTGTTAAAGATAGCTGATTTTGGTCTCTCAAGAACCGCACGCCCAGGTGAGTATGTTGAGACAGTTTGTGGAACTCCATTATACATGGCTCCTGAAGTTCTTCAGTTCCAGAGATATAATTACAAGGCAGACATGTGGAGTCTTGGGGTTATTCTTTTTGAGCTTCTAAATGGTTATCCACCTTTTAATGGCAGAAATAATGTTCAGCTGTTGAAAAACATCAGATCATGTACCTGTCTTCCATTTTCTCCATTGATTATTTCAGGATTGGATCCTGACTGTCTTGATATCTGTTCAAGACTACTATGCTTGAATCCAGGTTATGCATTTAAACACTAG 819 0.4066 MECEGKLVGMEKDEYKKNKYSYVLKSKIGEGSFSTVWIAEQTPTRQHVAIKQVFLSKLNPRLKASLDCEIHFLSSVNHPNIVHLLHFFQGDDECVYLVLEFCPGGNLASYIRSHGRIQQLTARMFMQQLGSALKLLHSHGIIHRDLKPENILLSSHGDDAVLKIADFGLSRTARPGEYVETVCGTPLYMAPEVLQFQRYNYKADMWSLGVILFELLNGYPPFNGRNNVQLLKNIRSCTCLPFSPLIISGLDPDCLDICSRLLCLNPGYAFKH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02472 272 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Car05g02472 272 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 21 266 IPR045269 GO:0004674|GO:0006914
Car05g02472 272 Gene3D Transferase(Phosphotransferase) domain 1 12 268 - -
Car05g02472 272 Pfam Protein kinase domain 22 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02472 272 SUPERFAMILY Protein kinase-like (PK-like) 17 266 IPR011009 -
Car05g02472 272 ProSiteProfiles Protein kinase domain profile. 22 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02472 272 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 21 266 - -
Car05g02472 272 SMART serkin_6 22 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02472 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02472 Car-Chr5 69837536 69839546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02472 22 266 CBL-interacting serine-threonine protein kinases AT2G30360 38.889 6.54e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Car05g02472 Pkinase 2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02472 - - lja:Lj1g3v1289070.2 417.542