Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02463 ATGAGAACTTTTCTCCGAAAGAACCTTTTGTTTTTCACTTATTCCCATTGTTCATCATCGCAACCTCGCACGCTTCTTTTTCGGTTTCAACTTTGCGAATTCTCATCTTCTCCAACTCCGTACTCTCACTGGAAGCGTCTCGACGAAGAGTCACGCAATGTTAGGGTTTCGGTGTGGTGGGATTTCGAGAACTGCAACGTGCCTGCAGGCGTTAACGTTACCAAAGTTGCACCTGCAATAACCGACGCCGTTAGAGCTAACGGAATTAAAGGTCCCCTTCATATTACGGCTTTTGGCGATGTTTTGCAGCTTTCTAGGGCTAATCAAGAAGCACTTGCTTTCACTGGGATTCATCTCACTCACATTCCCAACGGTGGAAAGAACAGTGCTGATAGATCTCTTCTTGTTGATCTTTTGTATTGGGTTTCCCAAAATCCTCCACCTGCACATCTCTTTCTGATATCTGGTGATAGAGACTTTGCTGGCATATTACACCGGTTAAGAATGAATAACTACAACATCTTGCTTGCAATTCCAGGTAAGGCTCCTGATGTTCTCCGCAGTGCTGCAACTATAATGTGGCAGTGGCCTTCATTGCTCAAGGGAGAAGATCTTACTGGAAAACATTTCAATCACCCTCCTGATGGTCCGTTTGGTTCTTGGTATGGAAACTCGAAAGTGCCTCTTGAAGACCCCTTCTCATCTGCTGATCAGTCTACATCTTCATCAAATGTGGAGATCCACGAGCCTTCTCCCGGTGGAATTCCAAAATCATTTATGAGGCGAGTTAGGCATATATTGAGTTCACATCCAAATGGCATAGCCATTTCAGATCTTCGCACAGAGTTGACAAAATGTGATGTGTCTTTAGGTAAAAGCATGTTTGGATATAAAAGCTTTTCCCGCTTACTATTATCAATACCACATGTACAACTCAAGCATTTAGGACATGGTAGTTTTTGTGTGCATTTGGTCACCTCAGAGCCCCCTGAAGCCTTTGAGAGAAGTACCGCACCATCATCGGCATCTGCTGTTGAGAATGACGAGAGTGGCTATACAATAACTCCAAAGCTACACAACGAGGGCAAAAACATTGACAGGGATGCACATAGGACTCCCTTAATCTCCTCATTGCATGAAAAGACCGATCGTGATGATTCAAAATCATTAAAATCTATCCCTTCACAAGGAAAACCTATCAAGGAATTTGTGTCACATAAATCATCTGTGGGTGGTGAGAAGGTTGTAGATGTGGCTAATGCACAATTGTCGGAGAGTCAACTCTCACCAAATGAAAATGATGTTTCCAAAAATGAGATGGGTTCCTTTGAAATGGGATCTAAAATGTTGTCTGATGATGACATTGTTAGATCTGAGGATGTAAGTCCCAAAGCTCTTGAAAAAAAAAACCCTTCAGGCAAGCCCTCTGCTGGTACTGATTACACAATCTTGGAAAACAATGATATCACAAATTGTGAATCTGGAAAATCTACAGCAAAGAGCATACTTGAGATTCAATCTAGAAAGGAGGTTGATGAAGTTTGTCATAGTCCAGATTCTTCCGCAGCTGATGACTCTCTGGTTGAGAAAAGACCTGATGGTTGTGCTGAAACTCACAGCAAAAGACCAACTTTCTTTAGCTGGATTAGAAGTTGGTGGCCGTTTTCAAAAAGCAATGCAAAGGCTGCTGAAACTCATCAGAACAATGTGACTAGTAATTTTGAGGATTCCAAATCATCTGAACTGGACCAGACTGCTAGTCAACTTGAAGAGCTCAAGCCATCAGAACCACGCCACAACGTCAGTCATTCTGGAAAGCCTGAGTTGTTTTCTAGTGGTTCCTTTTGGAATGACATGGAATCTTTTGTTTTCACCCCCAAAGGATCATTTCTTATTTCCCAGTCTAAAAGCAGGGAGGATTTGGCTCATAAATTACAGCAGCATGGACCCATGGATCTTAAATCCCTCACTGAAAATTATATCTTTCAATTGGTGGAATTGTTAATAGCTGAGAAAAAATGGTTGAACGAAAGCCCCTCACAAGCATTTCCTTTCCGGCTAACTCAATCAGTTCAGAAGAGATCACTGTCCGGCAAGTCTAATGGTGCTACTGGTTTGAGATCTCTATTTCTAAGTAGAATCTCACAGACTAACTTGCACAATTCGTTTGAACATGATGTGGAGAAACAATGTCAGAGTATTCAGCAAACAAGAGTTTCCAGACCTGCCACTGAAACGAAATATACTGAGATGTCTAGAAATGATATATTAGTAGACTGTCAGAAACTGGTAACTGAGATATTGAAGCAGCACCCAGAGGGATATAATATAGGTTCTTTTCGAAAACAATTTTTTAATAGATATGGCTATCACCTTGATATCAAGAAGCTTGGTTATCAAAAGTTGGCATACTTGATGCAGATAATGCCTGGAGTTAAATTAGAATCTACGTATATTTATCCTTCTGTGCTTGGTGTTTGTAACTCAGAAACTTCAATCCTCAAAGCTCAAGCAACCAATGATAGTCATGAAGACTTCAACTCCGATAATGAATTATCTGATACATCCCCAAAAGAGAATAACATGGAATCTCCTTGGGAAGAATTAGGCCCTGTTTCTGCTAAAAACACCAGTCAGAATGATAAGGAATCATACTTTAGTCAGAAAGCCATTGAACTGGATACACCGAATCATCCCAACTACGAACCCGTTATCTCTGATTACGATTCTTCCGAATCTGAAGGGGATAGCTCTTGTGTAACTCAACCAGAAGAGCACGAGCAAGGAAAGCCAAAATATGATGAGCACGACAGTTCTTTTTGGCAAGCTTTGGATTCCTGGCATAGCAGCAAGGAAGGAGAGACTAATGTCAATAAATCCGATAATGTTGATGTCAATGGCAATTCTCTGCTTGATATCTTAAGTTTATCCCCCGATTCAACACGGGGTACCATTTCCAAAAATAGTTTAAGAACCTTTAGAGAAAAGCAAACACCTCAAAAGTATTCATTTGTTGCTGACTCGGACTTACCTGACAAGGACAAGTTGATTGGTGGGATATTAGATGGGTTCAAGAAAATAGATGACTCGAAGATACAAAACTGA 3105 0.41 MRTFLRKNLLFFTYSHCSSSQPRTLLFRFQLCEFSSSPTPYSHWKRLDEESRNVRVSVWWDFENCNVPAGVNVTKVAPAITDAVRANGIKGPLHITAFGDVLQLSRANQEALAFTGIHLTHIPNGGKNSADRSLLVDLLYWVSQNPPPAHLFLISGDRDFAGILHRLRMNNYNILLAIPGKAPDVLRSAATIMWQWPSLLKGEDLTGKHFNHPPDGPFGSWYGNSKVPLEDPFSSADQSTSSSNVEIHEPSPGGIPKSFMRRVRHILSSHPNGIAISDLRTELTKCDVSLGKSMFGYKSFSRLLLSIPHVQLKHLGHGSFCVHLVTSEPPEAFERSTAPSSASAVENDESGYTITPKLHNEGKNIDRDAHRTPLISSLHEKTDRDDSKSLKSIPSQGKPIKEFVSHKSSVGGEKVVDVANAQLSESQLSPNENDVSKNEMGSFEMGSKMLSDDDIVRSEDVSPKALEKKNPSGKPSAGTDYTILENNDITNCESGKSTAKSILEIQSRKEVDEVCHSPDSSAADDSLVEKRPDGCAETHSKRPTFFSWIRSWWPFSKSNAKAAETHQNNVTSNFEDSKSSELDQTASQLEELKPSEPRHNVSHSGKPELFSSGSFWNDMESFVFTPKGSFLISQSKSREDLAHKLQQHGPMDLKSLTENYIFQLVELLIAEKKWLNESPSQAFPFRLTQSVQKRSLSGKSNGATGLRSLFLSRISQTNLHNSFEHDVEKQCQSIQQTRVSRPATETKYTEMSRNDILVDCQKLVTEILKQHPEGYNIGSFRKQFFNRYGYHLDIKKLGYQKLAYLMQIMPGVKLESTYIYPSVLGVCNSETSILKAQATNDSHEDFNSDNELSDTSPKENNMESPWEELGPVSAKNTSQNDKESYFSQKAIELDTPNHPNYEPVISDYDSSESEGDSSCVTQPEEHEQGKPKYDEHDSSFWQALDSWHSSKEGETNVNKSDNVDVNGNSLLDILSLSPDSTRGTISKNSLRTFREKQTPQKYSFVADSDLPDKDKLIGGILDGFKKIDDSKIQN 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02463 1034 MobiDBLite consensus disorder prediction 460 482 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 374 400 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 919 941 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 871 894 - -
Car05g02463 1034 ProSiteProfiles OST-type HTH domain profile. 756 830 IPR025605 -
Car05g02463 1034 PANTHER EMB|CAB71880.1 15 972 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 510 529 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 904 918 - -
Car05g02463 1034 CDD LOTUS 256 324 - -
Car05g02463 1034 CDD PIN_limkain_b1_N_like 55 179 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 232 254 - -
Car05g02463 1034 Gene3D - 47 196 - -
Car05g02463 1034 Pfam OST-HTH/LOTUS domain 761 815 IPR025605 -
Car05g02463 1034 Pfam OST-HTH/LOTUS domain 257 319 IPR025605 -
Car05g02463 1034 Gene3D - 751 818 IPR041966 -
Car05g02463 1034 Gene3D - 256 329 IPR041966 -
Car05g02463 1034 MobiDBLite consensus disorder prediction 374 391 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 839 964 - -
Car05g02463 1034 Pfam NYN domain 55 190 IPR021139 GO:0004540
Car05g02463 1034 PANTHER LIMKAIN B LKAP 15 972 IPR024768 GO:0005777|GO:0010468|GO:1903231
Car05g02463 1034 MobiDBLite consensus disorder prediction 232 248 - -
Car05g02463 1034 MobiDBLite consensus disorder prediction 564 606 - -
Car05g02463 1034 ProSiteProfiles OST-type HTH domain profile. 255 326 IPR025605 -
Car05g02463 1034 MobiDBLite consensus disorder prediction 564 591 - -
Car05g02463 1034 CDD LOTUS 759 812 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02463 54 310 C2H2 Transcription Factor Family AT5G61190 35.714 1.76e-38 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02463 - - mtr:MTR_3g095410 1182.16