Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02451 ATGTCAAGAACAAATATTGTTAACGAAAGCTTGTTTGATGAAGAAGAAGATCATCACGAGATCCCTATGCAGATGGGGTTCAATATTCCTTTCCCTCCAAACATGACCTTACCTCCTTTGGGTTGCCATGATCAATCTTTGAAAGGTAATATAAGTGCAATGTCTTCTTCACTTTCTCCTCAACCTCCAAATTTCTCCCAAACCCTACTTGCAACCGTTCTCCATAAACCACGCCAATTTGAAGATCTCACTTCCACTTTTGGAGGAGGATCCCACCTCCTTTCCTTGAACAGATCCGGAGTTAATTCATGGGCATGGGGAGAAGTAAGTGATTGCTTGATGGGTAAAAGAAGAGATGATAATGATAATGAATTAGGGGTTTCAGCCATAAAGATGAAGAAAATGAAGGCAAGAAGGAAAgtgagggagcctaggttttgcttcaagacaatgagtgatgtggatgtgttggatgatggatacaagtggagaaagtacggacagaaagttgtaaagaacacacagcatccaagaagctactatcgttgcacacaagataattgtcgagtaaagaaacgagtggagcgattggctgaggatccaagaatggtgataacaacatatgaaggaagacatgtccactcTCCATCAAATGAACTTGAAGACTCACAAAATCAATCTCAACTTGCTAATTTCTTCTGGTAG 705 0.2709 MSRTNIVNESLFDEEEDHHEIPMQMGFNIPFPPNMTLPPLGCHDQSLKGNISAMSSSLSPQPPNFSQTLLATVLHKPRQFEDLTSTFGGGSHLLSLNRSGVNSWAWGEVSDCLMGKRRDDNDNELGVSAIKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQNQSQLANFFW 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02451 234 SUPERFAMILY WRKY DNA-binding domain 149 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02451 234 ProSiteProfiles WRKY domain profile. 152 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02451 234 Pfam WRKY DNA -binding domain 158 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02451 234 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 76 227 - -
Car05g02451 234 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 227 IPR044810 GO:0003700
Car05g02451 234 Gene3D WRKY domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02451 234 SMART WRKY_cls 157 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02451 Car-Chr5 69577954 69579664 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02451 121 234 WRKY Transcription Factor Family AT4G39410 77.500 1.25e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car05g02451 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02451 - - gmx:100127389 334.724