Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02432 ATGAATCCCCCACCCAAATTCTTCTTCATCTCCGTCACACATTTACTTCTCATTCTACTCTCAACTTGCACCGCTTCACAACCGGAGCTCCGATCTCTTCTCGAATTCAAAAAAGGCATTACCATAGATCCATCCAATCGAGTTCTCAACTCATGGAATCCTTCTTCCGTCAACACTGCCAACTCATGCCCTCACTCATGGGTTGGAATCCTCTGCGACGACCTCACCGGAAACGTCACCGGAATTATCCTCGACGAATTCAGTCTCGTCGGTGAACTCAAGTTTCAAACTTTACTTGACCTTAAAATGCTTAAAAACCTTAGTCTCTCCGGTAACCGGTTCACCGGAAGGTTACCACCTTCGTTAGGTACACTAACTTCTCTTCAACATTTGGATCTTTCACATAACAACTTCTACGGTCCAATTCCGGCACGGATCAACGATCTTTGGGGACTTAATTACCTTAATTTATCACATAATGAATTCAAAGGTGGATTTCCAACTGGTCTCAACAATCTTCAACAACTTAGGGTTCTAGATTTGCATTCTAACAAACTTTGGGCTGACATTGGTGACCTTCTTCCCACTCTTCGCAACGTCGAATTCCTCGATTTGAGTCACAATCTTTTCTACGGTGGACTTTCACTTACTCTTCAGAATGTTTCATCTTTGGCTAATACAGTTCGTTACTTGAACTTGAGTCATAACAATTTGAATGGAAACTTCTTTCTCAATGATTCCATTGAATTGTTTCGCAATTTGCAAGCTTTGGATTTGACTGATAATTTGATCAGAGGGGAGCTTCCTTCTTTTGGTTCTTTGCCTGGACTTAGGGTTCTGAGACTTGCACGTAATCTCTTATTTGGGGCTGTGCCTGAGGATTTGTTGCAGAATTCAATGTCATTGGAAGAATTGGATCTTAGCTCCAATGGCTTTACTGGCTCAATTCCTGTAGTTAACTCTACCAGTTTAATTGTTTTGGATCTTTCATCGAATAGTTTATCAGGCTCATTGCCAACATCTTTGAGATGTACAGTCATAGACTTGAGCAAGAATATGTTATCCGGCGACGTTTCTGTTATAGAGACCTGGGAACCCACTATGGAGGTTATTGATCTGAGTTCCAACAAGCTGTCAGGACCCTTGCCTTCTACTTTAGGGACATATTCAAAATTGTCTACCCTTGACTTAAGTTTTAATGAACTTAATGGATCCATTCCAGTTAGTTTTGTTACTTCGTCATCCCTGACAAGGCTAAATCTTTCTGGAAATCAATTAACAGGGCCACTTTTGCTTCAAGGTTCAGGGGCAAGTGAATTACTGCTTATGCCTCCGTTTCAACCAATGGAATATTTTGATGTATCTAACAACTCTTTAGAAGGTGTCTTGCCTTCTGATATAGGTAGGATGGGTGGGCTCAAACTGCTGAATCTGGCAATGAATGGTTTTTCCGGACAGTTTCCAAATGAATTGGACAAACTTATTTACTTGGAACACCTTGATTTGTCTAACAACAAATTTACTGGAAACATTCCCGATAAGCTTTCATCTAGCTTGACTGTATTTAATGTGTCCAATAATGATCTATCAGGCCATGTTCCTGAAAATTTGCGGCGGTTTCCTCCTTCATCCTTTTTCCCCGGAAATGAAAAGCTAAAGTTACCAAATACATCTCCTGAAAATTCTTCAGTGCCAGATAATATTCCAGGTAAAGGTAAACATCATAGTTCGAAGGGTAATATCAGGATAGCAATTATTCTTGCTTCTGTGGGTGCTGCTGTGATGATTGCTTTTGTTTTATTGGCTTATCATCGAACACAAGCAAAAGAATTTCATGGTAGAAGTGAGTTTACTGGCCAAACTACTGGAAGAGATGCCAAGTTCGGAGGACTTTCAAGGCCTTCTCTCTTCAAGTTCAATGCAAATGCTCTACCTCCATCAACTTCTTTGAGCTTTTCTAATGATCACTTGTTGACATCTAATTCAAGGTCACTTTCTGGACAGCAGTCTGAGTTTATAACTGAAATATCTGAGCATGGCTTGTCCCAGGGAATGATAGCAAGTAGTTCAGCACCTGTAAATCCTAATTTGATGGATTACCCTCCCACGACATCTGGAAGGAAGTCTTCTCCTGGTTCTCCATTGTCGTCCTCACCACGTTTTATAGAGTCTTGTGAAAAGCCTGTGATGTTGGACGTCTACTCACCAGATCGACTGGCTGGGGAACTGTTTTTCCTGGATTCTTCGCTAGCATTCACTGCTGAGGAATTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTCTCTACAAAGCTACTCTGGACAGTGGTCATATGTTGACTGTAAAATGGTTAAGGGTGGGGTTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGAATTGGTTCTATGAGGCATCCAAACATTGTCCCACTACGAGCATACTATTGGGGGCCTAGGGAACAGGAGAGGCTTCTTTTAGCCGACTATATTCATGGAGACAGCTTGGCCCTCCATCTCTATGAGACCACACCCCGGAGGTACTCCCCATTGTCGTTCAGCCAGAGAATAAGAGTTGCAGTGGATGTTGCAAGATGTCTTTTATACCTTCACGACCGAGGGCTTCCCCACGGAAATCTGAAGCCGACAAACATTCTGTTGGCAGGCCCTGATTACAGTACTTGTCTTACTGACTATGGTCTACATCGGCTCATGACGCCGGCTGGAGTTGCAGAACAGATACTAAATCTAGGAGCACTTGGTTACCGTGCTCCAGAACTTGCTACTGCATCCAAACCAGTTCCATCATTTAAGGCAGACATCTATGCACTCGGGGTGATCCTAATGGAATTATTAACGAGAAAAAGTGCAGGCGACATAATATCTGGACAATCAGGTGCTGTCGATCTTACAGATTGGGTTAGGCTGTGTGAGAGAGAAGGAAGGGTAATGGACTGTATAGACAGAGACATTGCAGGTGGTGAAGAATCCTCAAAAGAGATGGACCAACTGCTTGCAACATCTCTCAGGTGTATTCTCCCTGTACATGAAAGACCTAACATCAGACAAGTTTTTGAAGATCTCTGTTCTATATTGGCTTGA 3120 0.4237 MNPPPKFFFISVTHLLLILLSTCTASQPELRSLLEFKKGITIDPSNRVLNSWNPSSVNTANSCPHSWVGILCDDLTGNVTGIILDEFSLVGELKFQTLLDLKMLKNLSLSGNRFTGRLPPSLGTLTSLQHLDLSHNNFYGPIPARINDLWGLNYLNLSHNEFKGGFPTGLNNLQQLRVLDLHSNKLWADIGDLLPTLRNVEFLDLSHNLFYGGLSLTLQNVSSLANTVRYLNLSHNNLNGNFFLNDSIELFRNLQALDLTDNLIRGELPSFGSLPGLRVLRLARNLLFGAVPEDLLQNSMSLEELDLSSNGFTGSIPVVNSTSLIVLDLSSNSLSGSLPTSLRCTVIDLSKNMLSGDVSVIETWEPTMEVIDLSSNKLSGPLPSTLGTYSKLSTLDLSFNELNGSIPVSFVTSSSLTRLNLSGNQLTGPLLLQGSGASELLLMPPFQPMEYFDVSNNSLEGVLPSDIGRMGGLKLLNLAMNGFSGQFPNELDKLIYLEHLDLSNNKFTGNIPDKLSSSLTVFNVSNNDLSGHVPENLRRFPPSSFFPGNEKLKLPNTSPENSSVPDNIPGKGKHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQAKEFHGRSEFTGQTTGRDAKFGGLSRPSLFKFNANALPPSTSLSFSNDHLLTSNSRSLSGQQSEFITEISEHGLSQGMIASSSAPVNPNLMDYPPTTSGRKSSPGSPLSSSPRFIESCEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLRAYYWGPREQERLLLADYIHGDSLALHLYETTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNILLAGPDYSTCLTDYGLHRLMTPAGVAEQILNLGALGYRAPELATASKPVPSFKADIYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDQLLATSLRCILPVHERPNIRQVFEDLCSILA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02432 1039 Pfam Leucine Rich repeat 299 314 IPR001611 GO:0005515
Car05g02432 1039 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Car05g02432 1039 MobiDBLite consensus disorder prediction 550 565 - -
Car05g02432 1039 MobiDBLite consensus disorder prediction 692 720 - -
Car05g02432 1039 SUPERFAMILY Protein kinase-like (PK-like) 762 1034 IPR011009 -
Car05g02432 1039 SUPERFAMILY L domain-like 53 340 - -
Car05g02432 1039 ProSiteProfiles Protein kinase domain profile. 759 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02432 1039 Gene3D Ribonuclease Inhibitor 295 435 IPR032675 -
Car05g02432 1039 Pfam Leucine Rich Repeat 497 513 IPR001611 GO:0005515
Car05g02432 1039 SMART LRR_typ_2 274 298 IPR003591 -
Car05g02432 1039 SMART LRR_typ_2 173 197 IPR003591 -
Car05g02432 1039 SMART LRR_typ_2 125 149 IPR003591 -
Car05g02432 1039 SMART LRR_typ_2 494 518 IPR003591 -
Car05g02432 1039 SMART LRR_typ_2 322 344 IPR003591 -
Car05g02432 1039 MobiDBLite consensus disorder prediction 546 576 - -
Car05g02432 1039 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Car05g02432 1039 PANTHER OS07G0626500 PROTEIN 14 1036 - -
Car05g02432 1039 Pfam Protein kinase domain 763 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02432 1039 Gene3D Ribonuclease Inhibitor 436 560 IPR032675 -
Car05g02432 1039 Pfam Leucine rich repeat 367 426 IPR001611 GO:0005515
Car05g02432 1039 Gene3D Transferase(Phosphotransferase) domain 1 838 1039 - -
Car05g02432 1039 Pfam Leucine Rich repeats (2 copies) 102 139 IPR025875 -
Car05g02432 1039 Gene3D Phosphorylase Kinase; domain 1 740 836 - -
Car05g02432 1039 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Car05g02432 1039 SUPERFAMILY RNI-like 295 541 - -
Car05g02432 1039 Gene3D Ribonuclease Inhibitor 191 294 IPR032675 -
Car05g02432 1039 PANTHER OS07G0626500 PROTEIN 14 1036 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02432 Car-Chr5 69429512 69435424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02432 8 1034 Receptor kinase-like Gene Family AT5G01890 26.605 1.66e-74 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car05g02432 Pkinase 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02432 - - gmx:100802768 1690.63