Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02431 ATGTCCAGAGAAAGGGAGAGATTTGAAGAGATAGGAAAGAAGATAAAGAGGGAAGGAGATGTTTCTTCTCAGATGGGAAGAAGACATATGTTAGGTCCTCCTGGAACCCTAAATACTATCACCCCTTGTGCAGCATGTAAGCTTTTAAGAAGAAGATGTGCTCAAGAGTGTCCCTTTTCTCCATATTTCTCCCCCCATGAGCCTCACAAGTTTGCTTCTGTTCACAAAGTTTTTGGTGCTAGCAATGTCTCAAAGATGCTAATGgaagtagcagagtgtcaaagagcagatgcagcaaatagtcttgtttatgaagcaaatgtgaggctaaGAGATCCAGTGTATGGATGCATGGGTGCAATTTCAGCATTACAACAACAGGTTCAATCTTTACAAGCTGAACTGAATGTAGTGAGAGGTGAAATACTTAAATACAAATTAAGGGAAGCTAACATGAATAATATGAATATGATATCACTACCCTCTTCtcatcatcatcatcatcatcatcatGTTTCAATGCTACTACCTAATTCCTCTGGAGGAGCTGTTTCAAATATTGCTACTAcacccctacctccaccaccaccaccaccaccacctcttcctcTTTCTACAATTACTTCTTCCTCTTCTTCTTTATACATCCAACAACAGAGTGATCCCAACAACTATAGCAGAATTTCAAGTGAACATCATAATAATATTTCCTATTTTGGTTAA 723 0.3071 MSRERERFEEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVAECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNVVRGEILKYKLREANMNNMNMISLPSSHHHHHHHHVSMLLPNSSGGAVSNIATTPLPPPPPPPPPLPLSTITSSSSSLYIQQQSDPNNYSRISSEHHNNISYFG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02431 240 MobiDBLite consensus disorder prediction 206 240 - -
Car05g02431 240 MobiDBLite consensus disorder prediction 189 205 - -
Car05g02431 240 MobiDBLite consensus disorder prediction 160 240 - -
Car05g02431 240 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Car05g02431 240 Pfam Lateral organ boundaries (LOB) domain 42 138 IPR004883 -
Car05g02431 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 240 - -
Car05g02431 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 26 240 - -
Car05g02431 240 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02431 Car-Chr5 69419943 69421453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02431 8 156 AS2 family AT2G30340 68.944 3.12e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car05g02431 LOB 8.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02431 - - gmx:100790799 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01724 02 46350163 46351212 Car05g02431 05 69419943 69421453 ECH
Car05g02431 05 69419943 69421453 Car05g02431 05 69419943 69421453 ECH