Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02413 ATGTCCTTCCCGTTCCATCGTCGATCTCAATCGGAGGTTCATTTCCGAATCCCCGAcgacttcgacctcgaaatggatcccttcgacttcgacGCCTCTCCGCTCCATTTCCAAGATCCACCTCCACACGATGACCTCCTTTCTTCTTACATTGATTCCGACAATTCCGGATCCAAACTCCTTTCTCCCTCCGCCAAATCTGGCAATGCAGATGACACTACCAACACCGGCAGGCCTGCTCACCGCCGAAGCAATTCCGCCGATACCTCTTCTTCTTTATTATCGGAAGGAATCGAATCTAAGAAAGCCATGTCCCCTGATAAACTCGCTCAATTGTGGACCGTTGATCCCAAACGAGCCAAGAGGATTTTGGCTAATCGTCAATCTGCTGCGCGTTCGAAAGAGAGGAAAGCTTGTTACGTTGTTGAGCTTGAAAGAAAAATTCACACTCTTCAAACTGAAGCAACAACTCTTTCTGCTCAATTAAATCTTTTTCAGAGGGATACAAGTGGTCTGTCTACTGAAAATACTGAGTTGAAGCTTCGGTTACAAGCTATGGAGCAACAAGCTAAGTTATGTGATGCTCTAAATGAAGCATTAAAGAACGAAGTTGATAGGCTCAAGATGGCTACTGGAGAGATGACAACTCATGCTGAAACCTATGGTTTGGGAATGCATCAATTTTCATATTCTCAAGCTCCGTCCTTCCAGCACCAGCCGCAACATGGGCCAAACGAACTTCGGGCTATGCAAATGCAGCAGTTTCATTCACACTCATCTAACATATCCACTCCCCACCAGCCTCAGTTTGATCTGCCCACTTCATATGATTTATCAGAAATGTTGTCAAGTGATTCTATCGGCCAGTTTCAGGGGTTGGACATTGGACACCGGGTTTCTCATGTTCTAATGCCTGACGGTCCCTCCATTTCTGTTAACAAAACCCACAATGCCTTTTGA 960 0.4385 MSFPFHRRSQSEVHFRIPDDFDLEMDPFDFDASPLHFQDPPPHDDLLSSYIDSDNSGSKLLSPSAKSGNADDTTNTGRPAHRRSNSADTSSSLLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTSGLSTENTELKLRLQAMEQQAKLCDALNEALKNEVDRLKMATGEMTTHAETYGLGMHQFSYSQAPSFQHQPQHGPNELRAMQMQQFHSHSSNISTPHQPQFDLPTSYDLSEMLSSDSIGQFQGLDIGHRVSHVLMPDGPSISVNKTHNAF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02413 319 PANTHER BZIP TRANSCRIPTION FACTOR 18 2 315 - -
Car05g02413 319 MobiDBLite consensus disorder prediction 32 93 - -
Car05g02413 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 116 179 IPR004827 GO:0003700|GO:0006355
Car05g02413 319 Coils Coil 183 203 - -
Car05g02413 319 MobiDBLite consensus disorder prediction 49 93 - -
Car05g02413 319 MobiDBLite consensus disorder prediction 255 274 - -
Car05g02413 319 CDD bZIP_plant_RF2 119 168 IPR044759 GO:0003700|GO:0006355
Car05g02413 319 Pfam bZIP transcription factor 118 175 IPR004827 GO:0003700|GO:0006355
Car05g02413 319 Gene3D - 117 189 - -
Car05g02413 319 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 2 315 - -
Car05g02413 319 SUPERFAMILY Leucine zipper domain 118 170 IPR046347 GO:0003700|GO:0006355
Car05g02413 319 SMART brlzneu 114 178 IPR004827 GO:0003700|GO:0006355
Car05g02413 319 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02413 Car-Chr5 69258905 69263846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02413 4 295 bZIP Transcription Factor Family AT2G40620 51.235 6.43e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g02413 bZIP_1 1.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02413 - - gmx:100807712 377.096