Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02407 ATGGCTTCAGGGTCTGCAGCAGCTTCTTCTTCAAATTGGGTCATGGAAAGTGGTGACATTCCTCATGTTCTTGCTGTTGAtgacaatcttattgatcgcaaacttgttgagaaactccttaggAATTCTTCTTGTAAAGTTACTACTGCAGAAAATGGGCCAATGGCTTTGGAGTTATTGGGCTTAACAAGTGGTGAACAGAGCACCTTGAATGGAGAATCAAAAGTAAATTTAGTTATCACAGACTATTGCATGCCAGGGATGTCAGGCTATGAGTTACTTAAGAAAATTAAGCAATCATCTATAATGAAGGAGGTGCCAGTAGTGATCATGTCATCTGAGAACATACCAACAAGGATCAACAAGTGTCTAGAAGAAGGAGCTCAAATGTTCATGTTAAAGCCTCTCAAACAATCTGATGTAAAACAATTGACATGTCAGTTAATGAATTTGGGGAGGTGA 462 0.3571 MASGSAAASSSNWVMESGDIPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPMALELLGLTSGEQSTLNGESKVNLVITDYCMPGMSGYELLKKIKQSSIMKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVKQLTCQLMNLGR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02407 153 Gene3D - 22 153 - -
Car05g02407 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 10 151 - -
Car05g02407 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 151 IPR045279 GO:0009736
Car05g02407 153 SMART REC_2 21 145 IPR001789 GO:0000160
Car05g02407 153 ProSiteProfiles Response regulatory domain profile. 22 149 IPR001789 GO:0000160
Car05g02407 153 SUPERFAMILY CheY-like 21 150 IPR011006 -
Car05g02407 153 Pfam Response regulator receiver domain 23 143 IPR001789 GO:0000160
Car05g02407 153 CDD REC_typeA_ARR 23 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02407 Car-Chr5 69184823 69186680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02407 22 150 Response Regulator Gene Family AT3G56380 73.282 1.16e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car05g02407 Response_reg 1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02407 K14492 - gmx:100778707 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02407 05 69184823 69186680 Car05g02407 05 69184823 69186680 ECH