Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02399 ATGAAGTTGCAGTTCTCTATTGCTTCTCTTGTTCTATTAATCTCCACACTCTCTCTCTTTGGCTTGATTGTAGCTTCTGCTGACTTGAACTCCGACCGACAAGCTCTATTGGAGTTTGCTTCGGCCGTCCCGCACGCCCCAAGGCTCAACTGGAATGACTCTTTTCCAATTTGTACTTCATGGGTTGGTGTGACTTGCAACTCGAACCAAACTCGTGTTGTAGGCCTCCATCTTCCAGGAATCGGATTAACCGGTTCGATTCCAGAGAACACTATAGGAAAACTAGATGCTCTTAGAGTTCTGAGTCTTCACTCCAATGGTCTTAAAGGGAATCTTCCTTCTAACATCCTTTCAATTCCTTCACTCCAATTTGCACACCTGCAGAAAAATAACTTCTCAGGTCCAATTCCTTCTTCTGTTTCACCTAAACTAATTGCATTGGATATTTCCTTTAACTCCTTCTCTGGTAGTATACCACCTGCATTTCAAAACCTTAGAAGACTCACATGGTTGTATTTCCAAAACAATTCTATATCTGGAACCATTCCTGATTTCAACCTTCCAAGTCTCAAATATTTGAATTTGAGCTATAATAACTTGAATGGTTCAATTCCAAATTCCATCAAAACATTCCCTTCTACTTCTTTTGTTGGAAATACTCTCTTATGTGGTCCACCTCTCAATCATTGTTCTTCAATCtccccttctccatctccatctccttcctccattcaccagccactctctccagctgcatcCACACAAAACCAAAAGGCAACCGCCGCTCATAAGAAAAGCTTTGGCATAGCTTCTATAATTGCTATAGTCATTGGAGGAATTGCCTTCCTCTCACTACTAGTTTTAGTGTTCTTTGTATGCTGCTTGAAGAAGAAAAACAGTAAAAGCAATGGCATACTGAAAAGAAAGGGAGCTTCTTGTGCTGGAAAGGCTGAAGTTTCAAAGAGTTTTGGGAGTGGTGTGCAGGCTGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGTTCATCTTATACCTTTGACCTTGAGGACTTACTAAAGGCTTCAGCTGAAGTTCTTGGAAAAGGGAGCTATGGTACAGCATACAAGGCTGTTTTGGAGGAGGGAACAACGATGGTGGTTAAAAGGTTGAAGGAAGTTGTGGTAGGAAAGAAGGAGTTTGAACAACAGTTGGATGTTGTTGGGAGAATTGGACGCCACCCTAATGTCATGCCACTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTTTGGTTTACAATTACATGCCTGGAGGCAGCTTGTTTTTCTTGTTGCATGGAAACAAAGGAGCAGGAAGAACACCATTTGATTGGGATTCAAGGGTAAAGATTGCACTTGGAGCAGCCAAAGGAATTGCTTTCATTCACTCAGAAGGGGGACCAAAATTCACACATGGAAACATAAAGTCAACCAATGTACTAATAACACAAGAACTTGACAGCTGCATTTCAGATGTTGGATTGCCTCCATTAATGAACACACCAGCAACCATGTCAAGAGCCAATGGATACAGAGCTCCAGAAGTAACTGATTCAAGAAAGATCACACAAAAGTCCGATGTATACAGCTTCGGCGTTCTTCTTCTTGAAATGCTAACAGGAAAGGTTCCAATGAGATATCCTGGATATGAAGATTTTGTTGATCTTCCAAGATGGGTTAGGTCTGTTGTTAGAGAGGAATGGACAGCTGAAGTATTTGATGAAGAGGTTCTTAGAGGACAATATGTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGGACTTGCTTGTGTGGCTAAGACACCTGATATGAGGCCTAGAATGGATGAAGCTGTTAGAATGATTGAGGAAATTAAACATCCTGAGTTTAAGAATAGGACATCCTCTGAGTCTGATTATTCTAATTTGCAGACACCATAA 1935 0.3938 MKLQFSIASLVLLISTLSLFGLIVASADLNSDRQALLEFASAVPHAPRLNWNDSFPICTSWVGVTCNSNQTRVVGLHLPGIGLTGSIPENTIGKLDALRVLSLHSNGLKGNLPSNILSIPSLQFAHLQKNNFSGPIPSSVSPKLIALDISFNSFSGSIPPAFQNLRRLTWLYFQNNSISGTIPDFNLPSLKYLNLSYNNLNGSIPNSIKTFPSTSFVGNTLLCGPPLNHCSSISPSPSPSPSSIHQPLSPAASTQNQKATAAHKKSFGIASIIAIVIGGIAFLSLLVLVFFVCCLKKKNSKSNGILKRKGASCAGKAEVSKSFGSGVQAAEKNKLFFFEGSSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTMVVKRLKEVVVGKKEFEQQLDVVGRIGRHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNKGAGRTPFDWDSRVKIALGAAKGIAFIHSEGGPKFTHGNIKSTNVLITQELDSCISDVGLPPLMNTPATMSRANGYRAPEVTDSRKITQKSDVYSFGVLLLEMLTGKVPMRYPGYEDFVDLPRWVRSVVREEWTAEVFDEEVLRGQYVEEEMVQMLQIGLACVAKTPDMRPRMDEAVRMIEEIKHPEFKNRTSSESDYSNLQTP 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02399 644 ProSitePatterns Protein kinases ATP-binding region signature. 358 389 IPR017441 GO:0005524
Car05g02399 644 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Car05g02399 644 SUPERFAMILY L domain-like 36 228 - -
Car05g02399 644 Pfam Protein kinase domain 356 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02399 644 Gene3D Transferase(Phosphotransferase) domain 1 428 642 - -
Car05g02399 644 Gene3D Phosphorylase Kinase; domain 1 317 427 - -
Car05g02399 644 CDD STKc_IRAK 358 623 - -
Car05g02399 644 Gene3D Ribonuclease Inhibitor 30 140 IPR032675 -
Car05g02399 644 PANTHER RECEPTOR-LIKE KINASE 3 643 - -
Car05g02399 644 SUPERFAMILY Protein kinase-like (PK-like) 356 623 IPR011009 -
Car05g02399 644 ProSiteProfiles Protein kinase domain profile. 352 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02399 644 PANTHER OS05G0588300 PROTEIN 3 643 - -
Car05g02399 644 Gene3D Ribonuclease Inhibitor 141 232 IPR032675 -
Car05g02399 644 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02399 Car-Chr5 69123589 69126900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02399 3 639 Receptor kinase-like Gene Family AT5G58300 58.713 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car05g02399 Pkinase 2.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02399 - - aprc:113868460 1041.57