Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02361 ATGGGTGAGGTAGTAAGGAGAAGAGAGAAGGAAGATGAGAAGTTGAGGGAAGAGGAAGAGAGTGGAGCTGAGAGTAGAGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTTTTGCCGAGGATGGTTTTGAGGGTGCTTTTGGTGGAAGCTGATGATTCCACAAGACAGATTATAACAGCACTTCTCAGAAAATGTAACTATAAAGTTGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTAAAGGGAAGACCAGGCAGTATCGATCTAATACTTACAGAAGTCGATTTGCCATCCATATCTGGCTATGCACTTCTCACATTAATTATGGAGCATGATAGTTGCAAAAGCATCCCTGTCATAATGATGTCCTCGCAAGATTCGGTCAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCTATTAGAATAAATGAACTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCACAGTCAAACACCGGCGTAAATGGACCTCAAGATGAAAGTGATGCACAGCAAAAGGTTGAAGCCACCGCTGAAAACAACGCTGCTAGTAATCATTCTGGCGGCGGTGCTGCTTGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACAAAGCCCAACATGGAAGCTGAGAGTGGCAGCCTGGTCGATATCGCACAGGAATTTTCTCCGACGAAATGTGCTGAAGCATATCCAAGTGGAATACAGACACATGAAGTTGACATTCAATTAGGCCAAGCATCGACCCCGCAGGACAATCACGATAGAGGATTAAGTGTGGCTAACTGCAAAAATGGTGAGACAAACACAAATAATGACAAGGATGGTGATGATCCTAGCATCAGTGGTGAGGTTCATGACAATCATTATGATCAAACTGACTCTTCTAAGGAAGCTATTGATTTGATTGGAGCATTTCGTAGTCGTCCAAATTGCGGTCTCAATAATTCATCAACTGATTGCACAGGCAAATTTGAATATTCTCCACAGCTTGATCTTTCTCTGAGAAGCTCTCATCACAGCAACTTTGAGAAGGAACTCAACGAAGAAAGGCATACGCTTATGCATTCTAATGCTTCAGCTTTCAAGCGGTATACTAACAGACAATTGCAAGCGTCACCTGCAGTAGTATTAAACTTCCCTGATCAACAAAGAGAACAAAAAATAAATAATGAGAACCATATTGCAGCTGGTTGCAACTCAGATAGTTCAATACCAAGTAAGCAAAAATGTATTGTATCTCCAGCCACAGCCCAATCAAAAGAATCCGAACTCGCAACTTCACATTCCCAACAAGGGCATTCTCTCCCAATTCCTGTAAAAGGTGTAAGGTTCAATGACCTATGCATGGCCTATGGTTCTGCGCTTCCTCCAGGGTTTCGTACGCAGTCTGGTCCACCATCAACGCCAGGTTCAGTTACGATTCTTGAACCAAACTTTCAAGCAGAAGCATTTTATCAGTCAAATGGTAAAGAAAATAATGCAGAACAACCTTATGAACCTCGTCATTCAAATGGAAACAACGCCCGGAACCAAATTGTCTACACACAGGAACACAAGTCAGAACATGCAGAGGATCAAAGACTTATCTCCCCTACAACTGATCAAAGCGTATCAAGTAGTTTCTGTAATGGAAATGCAAGCCATCTTAACAGCATTGGTTATGGAAGTAATTGTGGAAGTAATAGCAATGTTGAACAAGTTGCTACTTTCAGAACAGCAACAGTTTCGGAGGGTAAGAATGAAGAACTCACAAACAGCGGATATTCTCATCGATCTATCCTAAGAGAAGCAGCACTAAACAAGTTCCGGTTGAAACGAAAAGAGAGATGTTATGAGAAAAAGGTTCGATATGAGAGCCGGAAGAAACTAGCAGAACAGCGTCCTAGAGTGAAAGGACAATTCGTTCGACAAGTGAATCCTGAATCTATTGCTGCAGAAAAAGATGGAAATGAATACTGA 2025 0.4198 MGEVVRRREKEDEKLREEEESGAESRGGEMKGLMRWEKFLPRMVLRVLLVEADDSTRQIITALLRKCNYKVAAVADGLKAWEILKGRPGSIDLILTEVDLPSISGYALLTLIMEHDSCKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSNTGVNGPQDESDAQQKVEATAENNAASNHSGGGAACIQRNKELIEKGSDAQSSCTKPNMEAESGSLVDIAQEFSPTKCAEAYPSGIQTHEVDIQLGQASTPQDNHDRGLSVANCKNGETNTNNDKDGDDPSISGEVHDNHYDQTDSSKEAIDLIGAFRSRPNCGLNNSSTDCTGKFEYSPQLDLSLRSSHHSNFEKELNEERHTLMHSNASAFKRYTNRQLQASPAVVLNFPDQQREQKINNENHIAAGCNSDSSIPSKQKCIVSPATAQSKESELATSHSQQGHSLPIPVKGVRFNDLCMAYGSALPPGFRTQSGPPSTPGSVTILEPNFQAEAFYQSNGKENNAEQPYEPRHSNGNNARNQIVYTQEHKSEHAEDQRLISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSNSNVEQVATFRTATVSEGKNEELTNSGYSHRSILREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVNPESIAAEKDGNEY 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02361 674 Pfam Response regulator receiver domain 47 158 IPR001789 GO:0000160
Car05g02361 674 MobiDBLite consensus disorder prediction 643 674 - -
Car05g02361 674 ProSiteProfiles Response regulatory domain profile. 46 164 IPR001789 GO:0000160
Car05g02361 674 MobiDBLite consensus disorder prediction 169 203 - -
Car05g02361 674 Pfam CCT motif 617 659 IPR010402 GO:0005515
Car05g02361 674 MobiDBLite consensus disorder prediction 268 315 - -
Car05g02361 674 Gene3D - 43 262 - -
Car05g02361 674 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 649 IPR045279 GO:0009736
Car05g02361 674 MobiDBLite consensus disorder prediction 268 290 - -
Car05g02361 674 MobiDBLite consensus disorder prediction 291 315 - -
Car05g02361 674 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 10 649 - -
Car05g02361 674 SMART REC_2 45 160 IPR001789 GO:0000160
Car05g02361 674 ProSiteProfiles CCT domain profile. 617 659 IPR010402 GO:0005515
Car05g02361 674 CDD psREC_PRR 47 150 - -
Car05g02361 674 SUPERFAMILY CheY-like 45 171 IPR011006 -
Car05g02361 674 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02361 Car-Chr5 68822084 68826319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02361 30 477 Response Regulator Gene Family AT5G24470 43.319 5.61e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Car05g02361 Response_reg 2.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02361 K12130 - gmx:100777119 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02361 05 68822084 68826319 Car05g02361 05 68822084 68826319 ECH