Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02359 ATGGCGCTAGCACTTACtcttttctctattcgtccttcttcttcttcttcttcttcAAACCCTTCTCACTTCCTTCAACCCTCACTCCGTTCACCCTCAACCTTATCTCCTTTTCTTCATTCTCAACCCTCCTTCTCCCCCCTTATCATATCACAACCACAAATCAATGACTCTTCCCTTTTCCGATTTCAACCCTCCATCCACACTTTCTTCCACTGCTGCTGCACTACCTACACCGCCAATACCGACGTCCAATTCGGAACACTCGTCTCTTTGTTTGAAGAAATCGGTATTAGCTTTGAAGAAACCAAATTGCTCTTGCTCAATGCACCGGAACTCACATCAATACCAGTGGATTCATTGCGTGCTCGCGTTCATTCTTTGCATTCTCTCGGGTTAGATCGTGTTTCAATTTATTACTTAGTTATTAAACGCTTCACTGTTTTAACGGATAATGAAATTGAACACTTGTTAAGCTTTTTGAGAAATGAATTACAAGGACAACTTGAACAAGCTAAGCTTAAGCGTCTTTTATCGGATAATGAACCTAAATTCTTGGCTGGTTTTCCTCAAAAGGTTCAATTGCTTGTTGAACGTGGGATTCCTGTTGATAAAATTGTGCGTGTGCTTAACAAAGTGAATTTGTCAAAGGCACTTTGTCATAGGTCAATGGATGAAATTGATAGAATTATAGGTTTTTTAGAACCCTTTGGTGGTATTGCTTTGATTGTGAAATACCCTCCAATTCTCAATTATGATTTGGATTATCAGTTAATTCCGAGAATTAGAGTCCTTACTGAGCTTAGTGGAGGAGATGAGTGTGGTACTGGGAAAGTGCTGAATAGGTTTCCCATTATTTTGAATTATAGTGTGGAACACATCGAGGAACATATACAGTTCTTGAGGTCTTTTGCAGACTTTGATGATCAACAAATATTTAGGATAGTATCGGTGTTTCCAGCAATTTTTACTAGTAGCAGAGAGAGGAAACTGCGCCCTAGGATACACTTTCTCAAGGAATGCGGGTTAGACTCGGGTGATATCTTCAAGTTCTTGATCAAAGCACCCGTGTTTTTGAGCATTTCGTTCGACAAGAACCTTGCGTATAAGCTTGTCTTTTTGCTCAAGATTGGGTATAAATATAGGACGAAAGAGTTGACAGTGGCAATCGCGTCTTCTACTAGAATAAGTTGTGAGAATATGCAGAAGGTGATGAATCTTTTCTTGAATTATGGGTTTTCATCTGAAGACATTTTTGCTATGAGCAAGAAGCATCCACAGATACTGCAGTATAATCATGCCTCTCTAGAGAAGAAGATGAAGTACTTGATAGAGGATATGAATCGTGACATTCAGGAGTTGCTGGATTTTCCTGCATTTCTTGGATACAAGTTTGATGACAGAATTAAGCATAGGTATGAAATAAAGAAGGGTTTAAGGGGTGGACAAATGTCTCTCAATAAGCTTTTAACTGTTTCTAGTGAGGTGTTTACTGGCAAACCAAAGAAAGCTTCTTCTGTAAAATCTGAATTGAAATAA 1539 0.3801 MALALTLFSIRPSSSSSSSNPSHFLQPSLRSPSTLSPFLHSQPSFSPLIISQPQINDSSLFRFQPSIHTFFHCCCTTYTANTDVQFGTLVSLFEEIGISFEETKLLLLNAPELTSIPVDSLRARVHSLHSLGLDRVSIYYLVIKRFTVLTDNEIEHLLSFLRNELQGQLEQAKLKRLLSDNEPKFLAGFPQKVQLLVERGIPVDKIVRVLNKVNLSKALCHRSMDEIDRIIGFLEPFGGIALIVKYPPILNYDLDYQLIPRIRVLTELSGGDECGTGKVLNRFPIILNYSVEHIEEHIQFLRSFADFDDQQIFRIVSVFPAIFTSSRERKLRPRIHFLKECGLDSGDIFKFLIKAPVFLSISFDKNLAYKLVFLLKIGYKYRTKELTVAIASSTRISCENMQKVMNLFLNYGFSSEDIFAMSKKHPQILQYNHASLEKKMKYLIEDMNRDIQELLDFPAFLGYKFDDRIKHRYEIKKGLRGGQMSLNKLLTVSSEVFTGKPKKASSVKSELK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02359 512 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 94 504 - -
Car05g02359 512 PANTHER CGI-12 PROTEIN-RELATED 94 504 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 Pfam mTERF 331 497 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 Pfam mTERF 91 376 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 451 482 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 104 134 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 349 380 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 SMART mt_12 419 450 IPR003690 GO:0003690|GO:0006355
Car05g02359 512 Gene3D Transcription termination factor 3, mitochondrial 275 507 IPR038538 -
Car05g02359 512 Gene3D Transcription termination factor 3, mitochondrial 66 274 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car05g02359 mTERF 9.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02359 - - gmx:100799904 585.104