Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02353 ATGAAAATTGCATCCTCTTCAACATCCCTTTATAATTCCAACAGATTCCAAGAATCGACCCGAACCCGCGCTTTTCATAGGCAACTACAACAGCTTTTCCACTTGCATGATTCAGGTCTAGACCAAGCTCTCATAGACACTCTTCCACTTTTCAACTACAAAGCTTTAATGGGTTTGAAGGAACCTTTTGATTGTGCTGTGTGTCTCTGTGAGTTTTCTGATCAAGACCAACTGAGGTTGGTTCCTATGTGCAGCCATGCCTTTCACATGAACTGTCTTGACACATGGCTTCTCTCAAATTCTACTTGTCCTCTTTGTCGAGCAAATGTCTCTAGATCTAGTAGTTTTCTTTTACAGAATGTTGAAAATTCGAAAGAGAATATTGTTGAGTGTTCAGAATATAGTGAAAGAAAAATAACTGCAGAGGAACAAAGGGTGTTTTCTGTGAGACTTGGAAAATTCAGAAATAATGGAATAGTAGAGGATGGTACTTGTAGTTTGAATGAGAGGAGATGTTATTCAATGGGATCATATCAGTATGAGCTTTGTAATTCGAATTTGCAAGTGGTTTTGTTGTCTCAATCTTCTCGTTGTGATGATAAGTTAGGAAGTGAAGAAAATGGCAATGTGGAAGGGAAGAGGGTAGGGACCACAATTAAAGGTGAGAGCTTCTCTGTTTCTAAGATATGGCTTTGGTCCAAGAAGAGCAAATTTCCTAGTTCCAGTGTTAAAGGAGAAAAATTCGGAACTATTAGCGTCAAAGGGGAAAAATTCGGAGTAGCAGATAAAACTTATGAAACATTTTCCAAGATTAAATTCATCAGCTGGCCACTTATCAAAACCCAAACCACCGAAACCAATATCCCACATTTCTCATTTTGA 882 0.3844 MKIASSSTSLYNSNRFQESTRTRAFHRQLQQLFHLHDSGLDQALIDTLPLFNYKALMGLKEPFDCAVCLCEFSDQDQLRLVPMCSHAFHMNCLDTWLLSNSTCPLCRANVSRSSSFLLQNVENSKENIVECSEYSERKITAEEQRVFSVRLGKFRNNGIVEDGTCSLNERRCYSMGSYQYELCNSNLQVVLLSQSSRCDDKLGSEENGNVEGKRVGTTIKGESFSVSKIWLWSKKSKFPSSSVKGEKFGTISVKGEKFGVADKTYETFSKIKFISWPLIKTQTTETNIPHFSF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02353 293 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 243 - -
Car05g02353 293 SMART ring_2 65 106 IPR001841 -
Car05g02353 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 115 IPR013083 -
Car05g02353 293 CDD RING-H2_PA-TM-RING 64 107 - -
Car05g02353 293 Pfam Ring finger domain 64 107 IPR001841 -
Car05g02353 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 243 - -
Car05g02353 293 SUPERFAMILY RING/U-box 44 113 - -
Car05g02353 293 ProSiteProfiles Zinc finger RING-type profile. 65 107 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02353 Car-Chr5 68764134 68765015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02353 24 244 C3H Transcription Factor Family AT2G18650 40.288 1.46e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02353 - - cam:101488909 460.685