Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02344 atggttgcacatgtggcagattttggattagcaaggtttctctctcaaaatccagaagagaaacatagtagcaccctggaactgaagggatcaatcggctatattgcaccagAATATGGTTTAGGTGGCAAGGCTTCAACATGTggcgatgtgtatagttttggaatcctacttccagagatgctcatagcgaaaaaaccaacagatgaaatgttcaaagaAAGCATGAACAAATTTGTTTCAGACATGGATGAGAAGCAATTAATGAATGTTGTTGATCAAAGGCTTATTAAACATTATTATGAATATTCAAAACAGGATTTCAGCAGTGATTGTCGTAGCGATGGGTCTGGCGACAACAGCTATAGCAATGGACCTAATGGTAACACACATTTGATGCACAAAGTTGAGGAGTGCATAGCTGGTGCAATGAGAGTTGGCTTGTCATGTATAGCACATCATCCCAAAGATCGATGGACCATGCGAGAAGCCTTAACGATATTGCATGGAATTAAGCAGTTTATCCTAGACTTGTGA 537 0.2551 MVAHVADFGLARFLSQNPEEKHSSTLELKGSIGYIAPEYGLGGKASTCGDVYSFGILLPEMLIAKKPTDEMFKESMNKFVSDMDEKQLMNVVDQRLIKHYYEYSKQDFSSDCRSDGSGDNSYSNGPNGNTHLMHKVEECIAGAMRVGLSCIAHHPKDRWTMREALTILHGIKQFILDL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02344 178 Pfam Protein tyrosine and serine/threonine kinase 2 86 IPR001245 GO:0004672|GO:0006468
Car05g02344 178 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02344 178 Gene3D Transferase(Phosphotransferase) domain 1 1 175 - -
Car05g02344 178 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 169 - -
Car05g02344 178 MobiDBLite consensus disorder prediction 108 128 - -
Car05g02344 178 PANTHER RECEPTOR-LIKE PROTEIN 55 1 169 - -
Car05g02344 178 MobiDBLite consensus disorder prediction 110 128 - -
Car05g02344 178 SUPERFAMILY Protein kinase-like (PK-like) 2 172 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02344 Car-Chr5 68643885 68644639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02344 1 173 Receptor kinase-like Gene Family AT3G47110 31.844 2.52e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Car05g02344 PK_Tyr_Ser-Thr 5.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02344 - - cam:101497760 356.681