Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02343 ATGAGTGAGTTTCGCGTTCAAGACAAAGAACCTAGTAGTAGTACAAAAAAACCCACTACCACCAACAACAACATTGTTGTTGGATCGGTTTTTAAGGTGGAGAGTTTTGAAGGATCCCCTAATAAGatgatgatgatgcagcatcataatgataatcatcaccatcaccaccgttcatcctttcataatgatgatTCAAGTGTTGCTGGTCCCACAATGCCTTTTAGTGACGGTTATTCTTCTCTCAGTGCTGCTACCATTGACGGTGTATCTTTAAATTTGCAACCTTTTCACAGCATTTCTTCTTATAATAATATTACCTCGGCTACTACAACAACCCTCGAAACCCCAGGTGAAATGGGGGCGGTTTATCCTTTCACAATTGCACAATGGAACGAACTTGAAAGACAAGCTATGATTTATAAGTACTTGATGGCTTCTCTTCCTATTCCTTCTGATCTCCTCTCATTCATGCCTACTTCTTCTCACTCTTCATCTAATGGTGGTGGTTTCAATATGAAGTCATCAAGTAGTAGCAACACTGATCTAGAACCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCTAGAGATGTTGCTCCTAATCACAAGTATTGTGAACGACATATGCATAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCACACCAATTATGATaacaacaacaacaacaaTAGTCATCAAATCAAGAAGGCTCGCCATGATTCTAATCCTTTTCATCTGCCTGATGTTACTTTGGCTATTCCCAACTCAACTACAAGAAAATATGGATCTTCATCACATTCTCTTGCTTCTAATACCTTTCACCCTTATCTCCAATCTTCACTTTCTCTTGATAATAATAGCTTTGGTGTCAAAACTTCAAGTTTTGTTTCTTCAAGTAAACGACCAAGGGGTTTGGGGTGGATGCTAAATGGAGATACAATTTCTCTTGCTGTTTGTGACTCAGGATGGCAGCCTCTGATGCATAACAAAATTGGAATGACAACTGAAAGTTCCTATCATAATAACAACACTGAGTCTCATTATCTGAATTCATTTCCACTATataataataataataataCTTCTGAACTGACTCAACAACAAAAACCACTTCCTCTCTTCCTTAATCCTCTTGTTGTTCCAACGCAAACTCTCCAATCTGAGAAACCAAGAGGTTTCACTTTATTTGATGCTTGGCCTAACACAGAAACATTGGAAACCAACACCAACAACAACAATGCTTCTTCATCAATAGGTAAACTATCCCTTACATCTCTTGATATATCAATGGGAGGTTGTGTTATGAGTGAAGAAAATCAAGAAATGAGTACTATTGATATGGGTTTAGGCCTCATGGAAGAACCTAATGAAAACACAAGCAATGATGATGATGGTAATAAAATAGCACTTTCAAATTGGCTTAACCAAGAAACTTGGGTAGGTTCAAATTCAATACTTGGAGGTCCACTAGCTGAAGTTTTAAGGCCAAGCACAGTTACTACCATGAGTGATCCAACAACAAACTCAAATCCATCTTCACCAGCTACAAAACTTGTTGAATCAAGTGGCACTTTAGGAACTGCAAATGCAATGGTTTCTTCATCTCCATCTGGTGTTTTGCAAAACAAAACACTTGCTTCCTTTTCTGATAGCAGTGGTAACAGTAGTCCAACGGTTGCTTCATCAAGGACGAAATTGTCCAAGTTCAATTAA 1734 0.3662 MSEFRVQDKEPSSSTKKPTTTNNNIVVGSVFKVESFEGSPNKMMMMQHHNDNHHHHHRSSFHNDDSSVAGPTMPFSDGYSSLSAATIDGVSLNLQPFHSISSYNNITSATTTTLETPGEMGAVYPFTIAQWNELERQAMIYKYLMASLPIPSDLLSFMPTSSHSSSNGGGFNMKSSSSSNTDLEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVELHTNYDNNNNNNSHQIKKARHDSNPFHLPDVTLAIPNSTTRKYGSSSHSLASNTFHPYLQSSLSLDNNSFGVKTSSFVSSSKRPRGLGWMLNGDTISLAVCDSGWQPLMHNKIGMTTESSYHNNNTESHYLNSFPLYNNNNNTSELTQQQKPLPLFLNPLVVPTQTLQSEKPRGFTLFDAWPNTETLETNTNNNNASSSIGKLSLTSLDISMGGCVMSEENQEMSTIDMGLGLMEEPNENTSNDDDGNKIALSNWLNQETWVGSNSILGGPLAEVLRPSTVTTMSDPTTNSNPSSPATKLVESSGTLGTANAMVSSSPSGVLQNKTLASFSDSSGNSSPTVASSRTKLSKFN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02343 577 Pfam QLQ 125 155 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car05g02343 577 PANTHER GROWTH-REGULATING FACTOR 7 98 572 - -
Car05g02343 577 MobiDBLite consensus disorder prediction 506 527 - -
Car05g02343 577 PANTHER - 98 572 IPR031137 GO:0005634|GO:0006351|GO:0032502
Car05g02343 577 MobiDBLite consensus disorder prediction 161 184 - -
Car05g02343 577 ProSiteProfiles QLQ domain profile. 125 160 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car05g02343 577 MobiDBLite consensus disorder prediction 553 577 - -
Car05g02343 577 ProSiteProfiles WRC domain profile. 182 226 IPR014977 -
Car05g02343 577 MobiDBLite consensus disorder prediction 161 193 - -
Car05g02343 577 Pfam WRC 184 225 IPR014977 -
Car05g02343 577 MobiDBLite consensus disorder prediction 1 23 - -
Car05g02343 577 SMART QLQ_2 124 160 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02343 Car-Chr5 68631382 68634201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02343 426 528 GRF Transcription Factor Family AT5G53660 36.842 1.39e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Car05g02343 WRC 1.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02343 - - cam:101497429 1065.06