Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02337 ATGGGTCATTGCTGCAGCAAAAACATTGCAGTCAACAACGAAACCGTCGCCACCGATCACAACCTCAAAACGCCCAATCACGCGGCATCACCAGCTTCACAACCTACTGGAAATTCAGTCTCCGGCGTAAGCGATGCAACTCCGGGAAGATACACGCCGGCGACGTCGTTCTCCACCAGTCCTTTCAACAGTCCTCTTCCGGCAGGTGTGGCGCCGTCGCCGGCGAAGACTCCGGGAAGAAAATTCAGGTGGCCTCTTCCTCCGCCTTCTCCGGCGAAGCCGATAATGGCGGCGTTGAGGCGGCGGCAGGGGAAGACGAAACCGAAAGACGGACCAATACCGGAGGAGCAAGGGGGGGAAGGTGGGGAAGGAGAGAGGTCGTTGGATAAGAGTTTTGGGTATGGGAAGAATTTCGGTGCCAAATTTGAGCTTGTGAAGGAAGTTGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAAAAAGGTGAACTTAAGGGACAATCAGTGGCTGTGAAAATCATAACCAAAGCTAAGATGACTTCGGCTATAGCAATTGAAGATGTTAGGAGGGAGGTGAAAATGTTGAAAGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTGAATAACGTCTACATTGTGATGGAGTTGTGCGAGGGTGGAGAATTACTGGACAGAATTCTAGAAAGAGGTGGAAGATACACCGAGAAAGACGCCAAAGCTATTCTTGTACAAATTCTGAGTGTAGTTGCCTTTTGTCATCTTCAGGGAGTGGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTGTGTCAAAAGACGAGGATTCTGTTATGAAAGTTATTGATTTTGGTCTATCCGATTTTGTTAGGCCAGATCAACGCCTCAATGATATTGTTGGTAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTCGAAGGAGACTTATGGAGTATTGGAGTTATATCGTACATATTGTTATGTGGAAGTAGACCGTTTTGGGCACGGACTGAATCTGGAATCTTCCGCTCTGTGTTAAGAGCAAATCCTAACTTTGACGATACACCTTGGCCATCAATATCGCCCGAAGCTAAAGACTTCGTGAAGAGACTTTTGAACAAGGACCACAGGAAAAGGATGAGTGCTGCTCAAGCTCTATCTCACCCATGGTTGAGAGACGAAAGAAATGTCATTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATATGTGCGTGCCTCACCTTTGAAACGTGCGGCATTGAAGGCTCTCTCAAAAGCATTACCAGAGGATGAGCTTACTTACCTTAGAACACAATTTAGCCTCTTGGAACCCAAAGATGGTTGTGTTTCGCTTGAGAATTTCAGAGTTGCTCTCATGAAAAATGCAACTGATGCGATGAAGGAAGCAAGGGTCCCTGACATTCTAAATTTGATGGAGCCACTCTCCTATAAAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATCAGTGTATACCAGCTGGAAGTTCATCCAGAATGGGATAAAATAGCCACTACAGCTTTTGAATATTTCGACGAGACAGGGAACCGAGTCATTTCGCTCGAGGAGTTGGCACAGGAAATGAATTTGGGTCCTTCTGCTTATGCATTAATGGGCGATTGGATCAGAAAATCGGATGGAAAACTCAGCTTGGTCGGATATACAAAGTATATGCATGGTGTCACAATTCGTAGTTCGAATACAAGACACCGACAGCAATGA 1788 0.4536 MGHCCSKNIAVNNETVATDHNLKTPNHAASPASQPTGNSVSGVSDATPGRYTPATSFSTSPFNSPLPAGVAPSPAKTPGRKFRWPLPPPSPAKPIMAALRRRQGKTKPKDGPIPEEQGGEGGEGERSLDKSFGYGKNFGAKFELVKEVGRGHFGHTCWAKGKKGELKGQSVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDVNNVYIVMELCEGGELLDRILERGGRYTEKDAKAILVQILSVVAFCHLQGVVHRDLKPENFLFVSKDEDSVMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDTPWPSISPEAKDFVKRLLNKDHRKRMSAAQALSHPWLRDERNVIPLDILIYKLVKSYVRASPLKRAALKALSKALPEDELTYLRTQFSLLEPKDGCVSLENFRVALMKNATDAMKEARVPDILNLMEPLSYKKMDFEEFCAAAISVYQLEVHPEWDKIATTAFEYFDETGNRVISLEELAQEMNLGPSAYALMGDWIRKSDGKLSLVGYTKYMHGVTIRSSNTRHRQQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02337 595 SUPERFAMILY Protein kinase-like (PK-like) 141 428 IPR011009 -
Car05g02337 595 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 50 587 - -
Car05g02337 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 587 - -
Car05g02337 595 ProSitePatterns Protein kinases ATP-binding region signature. 148 174 IPR017441 GO:0005524
Car05g02337 595 Pfam Protein kinase domain 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02337 595 MobiDBLite consensus disorder prediction 21 130 - -
Car05g02337 595 MobiDBLite consensus disorder prediction 103 130 - -
Car05g02337 595 Gene3D Transferase(Phosphotransferase) domain 1 232 421 - -
Car05g02337 595 Gene3D - 443 511 - -
Car05g02337 595 Gene3D - 422 551 - -
Car05g02337 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Car05g02337 595 SUPERFAMILY EF-hand 437 582 IPR011992 -
Car05g02337 595 ProSiteProfiles Protein kinase domain profile. 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02337 595 MobiDBLite consensus disorder prediction 21 66 - -
Car05g02337 595 Gene3D Phosphorylase Kinase; domain 1 136 231 - -
Car05g02337 595 CDD STKc_CAMK 141 403 - -
Car05g02337 595 SMART serkin_6 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02337 Car-Chr5 68555788 68562360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02337 1 587 EF-hand Containing Proteins AT3G50530 57.480 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car05g02337 Pkinase 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02337 - - var:108331904 1042.34