Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02326 ATGAAGGGTTCATCAGATACGAAGCTTCTGCAAGATTTTTTGTTATACGCTGCGAGCGCTGCGTTGAGTTGCTTGGTATTGTTCACGGGGTTTCAATATCTCGACCCTAACCGTGAGACATCGAAGAAGGCTCTTGAGCATAAGAAAGCTATTGCAAAACGTCTAGGTCGACCCCTCATTCAAACAAACCCTTATGAGGATGTAATAGCTGGTGATGTTATAAATCCTGACCAGATTGATGTGGAGTTTGACTCCATTGGGGGACTGGAATCTATTAAAGAAGCTTTGTTTGAGCTTGTTATTCTTCCGCTAAAACGACCTGACTTGTTTTCGCATGGCAAACTCCTTGGACCACAAAAAGGGGCTCTGTTGTATGGACCCCCTGGTACTGGGAAAACCATGCTTGCCAAAGCTATTGCTAAGGAATCTGGAGCAGTTTTCATTAATGTAAGGATATCCAATTTGATGAGCAAATGGTTCGGAGATGCCCAAAAGCTTGTGTGTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAACGTCGTACGTCAGATCACGAGGCTTTGTTAAATATGAAAACCGAGTTCATGGCTCTATGGGATGGATTCACAACTGACCAGAATGCCCAGGTTATGGTACTTGCAGCAACTAATCGACCTTCAGAACTTGATGAAGCAATTCTTCGGCGTTTTCCTCAAGCCTTTGAAATTGGAATTCCGGACCAGAGGGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGTGAGAGAGTTGAAGATAACATAGACTTTGATTATATAGCTAGCTCATGTGAGGGTTACACTGGTTCAGACCTATTTGATATTTGCAAGAAAGCCGCCTATTATCCTATTAGAGAACTGCTGAATGACGAGAAGAAAGGGAAACAATCTCCTGCACCTAGACCTTTATCACAGTTCGATTTGGAGAAGGCGCTTTCCACTTCACGGAAGACATCGGTTGCTGCAAGCGAATACGGTGGATTGAATCTACAGTCATCATCAAGATGGACGACGTGTCCTGGTGAGTCAGAGTAA 1095 0.4347 MKGSSDTKLLQDFLLYAASAALSCLVLFTGFQYLDPNRETSKKALEHKKAIAKRLGRPLIQTNPYEDVIAGDVINPDQIDVEFDSIGGLESIKEALFELVILPLKRPDLFSHGKLLGPQKGALLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVCAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALLNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRFPQAFEIGIPDQRERAEILKVILKGERVEDNIDFDYIASSCEGYTGSDLFDICKKAAYYPIRELLNDEKKGKQSPAPRPLSQFDLEKALSTSRKTSVAASEYGGLNLQSSSRWTTCPGESE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02326 364 Pfam AAA+ lid domain 274 308 IPR041569 -
Car05g02326 364 CDD AAA 87 251 - -
Car05g02326 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 309 IPR027417 -
Car05g02326 364 SMART AAA_5 118 254 IPR003593 -
Car05g02326 364 Pfam ATPase family associated with various cellular activities (AAA) 123 251 IPR003959 GO:0005524|GO:0016887
Car05g02326 364 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Car05g02326 364 Gene3D - 80 338 IPR027417 -
Car05g02326 364 Gene3D - 253 333 - -
Car05g02326 364 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 2 342 - -
Car05g02326 364 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Car05g02326 364 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02326 Car-Chr5 68451985 68457494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02326 37 318 Calmodulin-binding Proteins AT3G56690 31.818 1.13e-36 139