Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02325 ATGGGTTTATCAGATACAAAGTTTCTGCAAGAGTTGTTGTTGCACGCGGCGAGGGCGGCGCTGAGTTACTGGGTACTGGTTACGGGGCTCCGATACCTTGACCCGAACCGGAAAGCATCGCAGAAGGCTCTTAAACAAAAGAAAGAGATTGCAAAGCGTTTAGGTCGACCACTTATTCAAACTAATCCTTATGAGGATGTAATAGCCTGTGATGTTATAAATCCTGACCACATTGATGTGGAATTTGATTCTATTGGGGGTCTAGAAACAATTAAACAAACTTTGATTGAGCTTGTTATTCTACCCTTAAAACGACCCGACTTGTTTTCTCATGGCAAGCTCCTTGGTCCACAAAAGGGGGTCCTGTTGTATGGACCCCCTGGCACTGGGAAAACCATGCTTGCAAAAGCTATTGCAAAGGAATCTGGAGCAGTTTTCATTAATGTAAGGATATCCAACCTAATGAGCAAATGGTTTGGGGATGCCCAAAAGCTTGTGTCTGCGGTGTTTAGCTTGGCATATAAGCTTCAACCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAACGCCGTTCATCAGATCACGAGGCTATGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCACCACCGACCAGAATGCTCAAGTTATGGTACTTGCAGCAACTAACCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGATTTCCTCAAGCCTTCGAAATTGGATATCCTAACCAGAGGGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGCGAGACTGTCGAAGATAACATAGACTTTAGTTATATAGCTGGCTTATGCAAGGGTTACACTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCGTATATTCCTATCAGAGAACTACTGGTTAATGAGAAGAAAGGGAAACAATCTCATCCCCCTAGACCTTTGTCGGTGTTAGATTTGGAGAAGGCCCTTTCTACTTCACGGAAGACAGCGGTTGCTGCAAATGAATACAGTGCAATGAACCAACAGTCATCATCAAGATCTCCATCTCCTGATGAATCAGATGACTATCGGGTTCAAGCTGCAATCGAGGAATTCGCTAAGCTTATGGGTTCTCGTAGATCAACCTCCAGTTAG 1158 0.4378 MGLSDTKFLQELLLHAARAALSYWVLVTGLRYLDPNRKASQKALKQKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFDSIGGLETIKQTLIELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSSDHEAMLNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRFPQAFEIGYPNQRERAEILKVILKGETVEDNIDFSYIAGLCKGYTGSDLFDLCKKAAYIPIRELLVNEKKGKQSHPPRPLSVLDLEKALSTSRKTAVAANEYSAMNQQSSSRSPSPDESDDYRVQAAIEEFAKLMGSRRSTSS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02325 385 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 4 348 - -
Car05g02325 385 MobiDBLite consensus disorder prediction 338 357 - -
Car05g02325 385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 305 IPR027417 -
Car05g02325 385 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Car05g02325 385 Gene3D - 252 332 - -
Car05g02325 385 SMART AAA_5 117 253 IPR003593 -
Car05g02325 385 MobiDBLite consensus disorder prediction 338 364 - -
Car05g02325 385 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Car05g02325 385 Pfam AAA+ lid domain 273 306 IPR041569 -
Car05g02325 385 Gene3D - 79 338 IPR027417 -
Car05g02325 385 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 4 348 - -
Car05g02325 385 CDD AAA 86 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02325 Car-Chr5 68442695 68449572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02325 80 311 Calmodulin-binding Proteins AT3G56690 35.714 1.03e-39 149