Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02301 ATGGACTTTTTCACGGAACATCAAATTACTCAAGGTTCCAACTTTTTTTACAATGCTCAACCTCAACAAATCGACACACCAGAAGACAAAATCATGGATATTTCACCGCTTGATGGTTTCGTTGATTTTAATTGGGAAACTGAGTTCCAAAGGAATGAACTTTACATCAGTGATGAGTTCAAAGATCTTGAAAATTTCAACTTTGACTTCAACCTTCCACACCTCGAACAAGATTTTGAGGTCGACCAAAAACCCCTCAATGCAGTCTTACCCCAATTGGAACATTGCAATGATGAAGGTGTGAGTGGTTTTATTGAAAATGGGTTTGTGAGTTGTGTCAAGAAAGAGGAGGAAGAGGAGGAAAAAGAGAAGCCATTGTCATTGGCATTGCTTAGTGGTTGTTCTAGCAAGAAAAAAAGGTCTTCTTTATTGGAATTTGATGATATAAAGAAGCATTTTAATGTTCCTATAACATTGGCTGCTAAGAGATTGAATGTGGGGTTAACCCTTTTGAAGAGAAGGTGTAGGGAGCTCAAAATCACAAGGTGGCCTCATAGAAAACTAAAGAGCTTGGTGTTACTCATCGACAACCTCAAGAAAATGGGTTTGGCTGACGAGGTTGTGAAGTTGGAGAAACACAAAAAGATGTTGGAGAAACTTCCGGGAATTGAATTGAATGAAGAAATAAAAAGGCTGAGGCAGGCTTGTTTTAAAGCTAATTACAAGAGGAGAAGATTAATTGGCTCTAGACCTTGA 756 0.3836 MDFFTEHQITQGSNFFYNAQPQQIDTPEDKIMDISPLDGFVDFNWETEFQRNELYISDEFKDLENFNFDFNLPHLEQDFEVDQKPLNAVLPQLEHCNDEGVSGFIENGFVSCVKKEEEEEEKEKPLSLALLSGCSSKKKRSSLLEFDDIKKHFNVPITLAAKRLNVGLTLLKRRCRELKITRWPHRKLKSLVLLIDNLKKMGLADEVVKLEKHKKMLEKLPGIELNEEIKRLRQACFKANYKRRRLIGSRP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02301 251 Pfam RWP-RK domain 144 191 IPR003035 -
Car05g02301 251 ProSiteProfiles RWP-RK domain profile. 127 212 IPR003035 -
Car05g02301 251 PANTHER PROTEIN RKD1-RELATED 110 247 - -
Car05g02301 251 PANTHER PROTEIN RKD4 110 247 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02301 Car-Chr5 68217358 68219250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02301 144 248 AtRKD Transcription Factor Family AT5G53040 60.952 9.17e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Car05g02301 RWP-RK 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02301 - - aprc:113850801 257.299