Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02286 ATGGGATACGGGAGGTTAGGAGTATCCGAGCCTGATGGTTCGACACACTCCGAAGCTACACACACTAACGCGAGATCTTCAACAAAGAGAAAGACGGTTTTGTTTTCACTCATTGCCGTTTTACTAATCGTCGCCTCCGCTGTTTCCGCCGTAATGCTAACCGGAATCCATTCCCACGGCGAAGATCGAAAAAAATCTACTCTCCGGCGTAATCCAACTCGAGCAATTTCTCTCACGTGCAGCAAAACTCGATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACACTCTGCGTTAACTCCTTCCTCGATTTCCCTGGATCCACAATTGCATCGGAGAAAGACCTCGTTCACATTTCCCTCAACATGACGCTGCAGCATCTCTCCAAAGCACTCTATTCCTCCGCCTCCATTTCCTCAGCCGTCGGCATGAATCCACGTATCCGCACCGCTTATCAAGATTGCCTCGAGCTTCTCGACGATTCAATCGATGCCGTCGCGAAGTCGCTCACCTCCGTCAAACCTTCCACCTCTAGCGGCTCCATTAAGCCTCTCGCAGCATCCTCCACCGACGATGTCTTAACGTGGCTTAGCGCCGCGCTTACGAACCAAGACACGTGCGCTGAGGGTTTTTCCGACACTTCCGGCGAAGTGAAGAATCAGATGACTAATAATTTAAAGGACTTGTCGGAGCTGGTGAGTAATTGTCTTGCCATTTTCTCTGCCTCCGGTGTCGGTGATGATTTCTCCGGCGTTCCTATACAGAACAAGAGACGGTTATTGACAATGCGGGAAGATAATTTTCCGAAGTGGTTGAGTAGACGAGAGAGGAGATTGCTGAACTTGGCGGTGTCGGAAATACAGGCAGATGTAATAGTCTCTAAAGACGGTAACGGAACGGTGAAAACTATAGCTGAAGCTATTAAGAAAATACCTGAATATGGTAACCGACGCTTCATTATCTATATCAGACAAGGAAGGTACGAAGAAGACAATTTAAAGATAGGAAGGAAGAAAACAAATGTTATGATCATAGGGGACGGAAAGGGCAAAACAGTCATCACAGGTGGAAAAAATGTTATGCAAAATTTGACCACATTTCACACGGCTTCCTTTGCTGCTAGTGGGCCAGGTTTCATTGCAAGAGACGTGACGTTCGAGAACTACGCCGGACCAGCAAAGCACCAAGCGGTGGCCCTCCGTGTCGGAGCAGACCACGCGGTGGTGTATCGTTGCAACATCATAGGATACCAAGACACAATGTATGTCCACTCAAACCGTCAATTTTACCGCGAATGTGACATTTACGGTACCGTGGACTTCATATTCGGCAACGCTGCAGTTGTTTTTCAAAACTGTAGCCTCTACGCTCGCAAGCCCATGGCCCAACAAAAAAACACAATTACGGCCCAAAACAGAAAAGACCCGAATCAAAACACGGGTATTTCAATCCATAACTGTCGGATCCTTGCGACACCAGATCTAGAAGCATCCAAGGGTAGCTTCCAAACGTATCTGGGCCGTCCATGGAAACTATACTCTAAAACTGTGTACATGTTATCATACATGGGAGATCACATACATCCACGTGGATGGCTAGAATGGAATGCAACATTTGCTTTAGACACGTTGTACTATGGTGAATACATGAATTATGGGCCGGGTGGAGCTATTGGTCAACGAGTAACGTGGCCCGGGTTTCGGGTTATAACGTCCACCGTGGAAGCAAATAGATTTACGGTGGCCCAATTCATATCGGGCTCGTCTTGGTTACCGTCTACTGGGGTGGCATTCGTAGCTGGCTTATCCACCTGA 1980 0.4313 MGYGRLGVSEPDGSTHSEATHTNARSSTKRKTVLFSLIAVLLIVASAVSAVMLTGIHSHGEDRKKSTLRRNPTRAISLTCSKTRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCVNSFLDFPGSTIASEKDLVHISLNMTLQHLSKALYSSASISSAVGMNPRIRTAYQDCLELLDDSIDAVAKSLTSVKPSTSSGSIKPLAASSTDDVLTWLSAALTNQDTCAEGFSDTSGEVKNQMTNNLKDLSELVSNCLAIFSASGVGDDFSGVPIQNKRRLLTMREDNFPKWLSRRERRLLNLAVSEIQADVIVSKDGNGTVKTIAEAIKKIPEYGNRRFIIYIRQGRYEEDNLKIGRKKTNVMIIGDGKGKTVITGGKNVMQNLTTFHTASFAASGPGFIARDVTFENYAGPAKHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHNCRILATPDLEASKGSFQTYLGRPWKLYSKTVYMLSYMGDHIHPRGWLEWNATFALDTLYYGEYMNYGPGGAIGQRVTWPGFRVITSTVEANRFTVAQFISGSSWLPSTGVAFVAGLST 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02286 659 Pfam Plant invertase/pectin methylesterase inhibitor 151 294 IPR006501 GO:0004857
Car05g02286 659 MobiDBLite consensus disorder prediction 1 25 - -
Car05g02286 659 ProSitePatterns Pectinesterase signature 2. 490 499 IPR033131 -
Car05g02286 659 SMART PMEI_2 71 294 IPR006501 GO:0004857
Car05g02286 659 PANTHER PECTINESTERASE 22 86 - -
Car05g02286 659 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 151 296 IPR035513 -
Car05g02286 659 PANTHER PECTINESTERASE 150 657 - -
Car05g02286 659 Pfam Pectinesterase 345 642 IPR000070 GO:0030599|GO:0042545
Car05g02286 659 PANTHER PECTINESTERASE 150 657 - -
Car05g02286 659 PANTHER PECTINESTERASE 22 86 - -
Car05g02286 659 SUPERFAMILY Pectin lyase-like 342 656 IPR011050 -
Car05g02286 659 CDD PMEI-like_3 152 297 - -
Car05g02286 659 Gene3D Invertase/pectin methylesterase inhibitor family protein 147 297 IPR035513 -
Car05g02286 659 Gene3D - 338 657 IPR012334 -
Car05g02286 659 TIGRFAM PME_inhib: pectinesterase inhibitor domain 150 295 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02286 Car-Chr5 68085410 68090262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02286 152 658 Carbohydrate Esterase AT3G49220 70.980 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02286 - - gmx:100808236 834.328