Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02284 ATGTATACAGAAAATGGACTTCTTTTCCCATGGTCATATCTACACAACTTCTCTCAAGAACTTCATCAACTTGAAGAGTACTGCAAAACCCAGAAGCCCAATGCATCAATGAGTGAGCTTGTTCATTTTTCTGCCATGTCAGAATATGATTTTGCTGCTGAAGGAGATTTGTTCAAAGCACCCGAACCGATTATCGAAGAGCCAGATATTGACCTTGATCCCATGACAGCAGCCATCTCAATGATATCTTGTGGAGAGGATGTAAAATCCACAGATATTTCTATTCTTCAAAACGAACAGCTTTTAAGTGATGTATTCTATGAATGCAAAAAGGATCTCTTTGAAAAGGCAGCAATGGAGTCTCCGCTCTCCGAGATTCTTGAAATCAAGGTTCCCCTATTAAACATTGATGAGAACATAATTCAAGAAAACAAGCCATTTCCTGACATGCTGTTACCAAAGAGCGTCAGCTCAGGAAGTTTAAGCTCGATGGATTGGATGCATGGATCTGCTATGAAGCCTGGTTTCCTTGGTATCCAAGGAGTAGATTTTGATGCAGTATATGGAATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGCAAAGGTAACATGAGCACGGTCCAATCTCCCGTTGAGAGGCCGTTTTTTAGCAGCAACTGCAGCAGTGAGGAACGTCTACAAAAGCTCTCTAGATACAGGAACAAGAAGACAAAGAGAAATTTTGGGAGGAAAATAAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGAATGAAGAATGTGATGCAAAGAGGGAATGA 837 0.4098 MYTENGLLFPWSYLHNFSQELHQLEEYCKTQKPNASMSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02284 278 ProSiteProfiles CCT domain profile. 228 270 IPR010402 GO:0005515
Car05g02284 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 276 - -
Car05g02284 278 Pfam CCT motif 228 270 IPR010402 GO:0005515
Car05g02284 278 PANTHER CCT MOTIF FAMILY PROTEIN 28 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02284 Car-Chr5 68059958 68063904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02284 224 272 C2C2-CO-like Transcription Factor Family AT5G57660 53.061 1.54e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car05g02284 CCT 4.3e-17 CL0281