Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g02283 | ATGATTATCAAGCGGAACTTGAAATCTCAAATGCCGAGGTTGAAACGGTGCAAAAACGCTGACTCAGTGGGTGAAGACGACGAGTGTTCTTATGTTCGTAAGAAGAGAAAGACGAGCGGTTCTTATTATCCTCTGAATCTTCTAGGAGATGTCGCCGCCGGATTAATTCCGGTGAGTTTTCACGGTCTTCTTAGTGCAGGTTTATCGGAGAAGGGATTCTCTGCGTCGTGGTGCACCCAAGTTCCGTGCTCCCCCGGTGAAGTTGAATCGAACTCGAAGGAAGAAATGGTTCCAGTGAAGAAAAACCAAGTTCAGCGACCACCACTTGTTCGAACTTCCAGAGGGAGAGTTCAGGTTCTTCCTTCTCGTTTTAATGACTCTGTTATTGATAATTGGAAGAAAGATAGTAGAACCAGCTTGCGTAATAATCATGTTGAAGATGAATTTGAATGCAAGAAGGATAGGGTGGTACCTAGAACTTGCCACAACAATGGTAAAAAAGGGCGAAACCATGAGAAAATCGGTTATAAACCACGCAAGTATTCGGCATTGTGTGGCAGGgatgatgaggataatgatgatgatgtgaGGTTTAAGAGTTTTGGTACAAGGAAGGATGAGAGAAGTAGTTACTTGGAGGTGGATGGAGATGAAGTTGATTTGATGGGTACCAGTGATAAAGTATTGAAGGAGAATGGAGAGAAGAAAGATGGGTTATATGGACCAGAAGATTTTTATGCAGGTGATATAGTGTGGGCCAAAGCTGGGAGGAAGGAACCTTTTTGGCCAGCTGTTGTTATTGATCCTACAAAACAAGCACCTGAGCTTGTCCTGAGGTCTTTTATAGCTGATGCTGCGTGTGTCATGTTTCTTGGCTATGCGGGGAATGAAAATCAAAGGGACTATGCATGGGTGAAGCATGGCATGATCTTTCCATATACGGATTATGTGGACAGGTTTCAAGAGCAACCTGAATTGAGTAACTATAATCCCTCTGAGTTTCAAATGGCAATAGAGGAGGCTTTTTTGGCAGACCAAGGCTTCACAGAGAAGTTGATGGATGATATAAATGCAGCAGCTGGTAACACTGGTTATGATGATATTATTCTGAAATCCTCCTTCAAGGAGGTCAATGGTTCAAACCGGTATGCAGGAGCAGGACAACATCTTGTTAATCAGGATTTATTTGATAAGAAAGACACATGTGAAGCCTGTGGATTGGATCTTTCTTACAAGATGTCAAAGAAAACCAAGGGTTTGACTCCTAATGGTCAATTCTTATGTAAAACATGTGCAAGGTTAACGAAATCAAAACATTATTGTGGCATATGCAAGAAAGTTTGGAACCATTCGGATAGTGGAAGCTGGGTGCGCTGTGATGGATGTAAAGTGTGGGTGCATGCCGAATGCGACAAAATTTCTAGAAACCATTTCAAGGATCTTGAAGGCACCGATTATTACTGCCCTACTTGCAGAGCCAAGTTTGACTTTGAGTTATCTGATTCAGAAAAATCAAAGCCAAAAGTGAAATTGAACAGAAACAATGGCCAACTAGTACTTTCAAATAAGGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTTCCAAGCCTTCACTTAGTTGTGTGCAAGTGTGGTTTTTGCGGGAAAGAAAAGCAAGCGCTTAGCGAATGGGAACGACACACAGGTTCCAAATTAAGAGATTGGAAAACAAGTATCAGCGTGAAAGACTCTAGGCTATCTCTGGAACAATGGATGCTGCAGGTAGCAGAATTTCATGCTAATGCTCAAGTTTCTTCAAAACCTAAAAAACCATCCTTAAAGGAAAGGAAGCAGAAGTTGCTTGCTTTCTTGAAAGagaggtatgaacctgtttatgctaagtggactacggagcgttgtgctgtttgtagatgggttgaagactgggattacaataaaattatcatttgcaacagATGTCAAATAGCCGTTCACCAAGAATGCTATGGAGCAAGAAATGTTCGAGACTTTACATCTTGGGTCTGTAAGGCCTGTGAAACACCTGAGATCAAGCGGGAGTGTTGTCTTTGTCCCGTAAAAGGTGGTGCTCTAAAGCCAACTGATATTGACACATTATGGGTTCATGTCACCTGTGCTTGGTTTCGACCTGAAGTCTCGTTCGCTAGTGATGAGAAGATGGAACCTGCTTTGGGTATTCTTAGTATTCCATCAAATTCTTTTGTGAAGATTTGTGTTATTTGCAAACAAATCCATGGTTCGTGCACACAGTGTTGCAGATGTTCCACTTATTACCATGCCATGTGTGCATCAAGAGCTGGTTACCGAATGGAGTTGCATAGTTTTAAGAAATATGGAAAGCAGACAACAAAAATGGTTTCGTATTGTGCTTACCACAGAGCTCCAAATCCAGACACTGTTTTGATTTTGCAAACCCCTCTTGGGGTCATTTCAACAAAAAGCCTTCTCCAAAAGAGAAAAGCTGGGTCAAGGTTAATCTCATCTAGCAGAATAAAGGAAGAAGACACTCCTAATGATATTGCCGAGAATGACCCGTTCTCTGCTGCTAGGTGTCGTATCTTTAAAAGAACAAATCATACCAAAAAGAGAGAAGTAAATGAAGCTGTTTTTCATCAAGTGAGGGGTCACTGCCACCATCCCTTAGATGCAATACAGAGTTTAAATACATACAGAGCAGTAGAGGAGCCTCAGACGTTCTCTTCTTTCAGAGAACGCCTTTACCACTTGCAGAGAACCGAAAATGAAAGGGTTTGCTTTGGTAGATCTGGCATACATGGATGGGGTTTATTTGCACGAAGGAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGCGAACAAGTGAGACGCAGCATCGCTGATCTGAGGGAGGCACGCTATAGAGCAGAAGGGAAAGATTGCTACCTGTTTAAGATAAGTGAAGAAGTGGTGGTAGATGCCACTGATAAAGGGAATATAGCACGACTAATAAATCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTTGGTGATGACGAGAGCCGGATTGTACTCATCGCTAAGGCTAATGTATCTGCTGGTGATGAGCTAACATATGACTACTTATTCGATCCTGATGAGCCAGATGAATTTAAAGTCCCCTGCCTGTGTAAAGCGCCAAATTGCCGGAAATTCATGAACTAG | 3198 | 0.4046 | MIIKRNLKSQMPRLKRCKNADSVGEDDECSYVRKKRKTSGSYYPLNLLGDVAAGLIPVSFHGLLSAGLSEKGFSASWCTQVPCSPGEVESNSKEEMVPVKKNQVQRPPLVRTSRGRVQVLPSRFNDSVIDNWKKDSRTSLRNNHVEDEFECKKDRVVPRTCHNNGKKGRNHEKIGYKPRKYSALCGRDDEDNDDDVRFKSFGTRKDERSSYLEVDGDEVDLMGTSDKVLKENGEKKDGLYGPEDFYAGDIVWAKAGRKEPFWPAVVIDPTKQAPELVLRSFIADAACVMFLGYAGNENQRDYAWVKHGMIFPYTDYVDRFQEQPELSNYNPSEFQMAIEEAFLADQGFTEKLMDDINAAAGNTGYDDIILKSSFKEVNGSNRYAGAGQHLVNQDLFDKKDTCEACGLDLSYKMSKKTKGLTPNGQFLCKTCARLTKSKHYCGICKKVWNHSDSGSWVRCDGCKVWVHAECDKISRNHFKDLEGTDYYCPTCRAKFDFELSDSEKSKPKVKLNRNNGQLVLSNKVTVLCNGVEGIYFPSLHLVVCKCGFCGKEKQALSEWERHTGSKLRDWKTSISVKDSRLSLEQWMLQVAEFHANAQVSSKPKKPSLKERKQKLLAFLKERYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPEIKRECCLCPVKGGALKPTDIDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCRCSTYYHAMCASRAGYRMELHSFKKYGKQTTKMVSYCAYHRAPNPDTVLILQTPLGVISTKSLLQKRKAGSRLISSSRIKEEDTPNDIAENDPFSAARCRIFKRTNHTKKREVNEAVFHQVRGHCHHPLDAIQSLNTYRAVEEPQTFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYRAEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKANVSAGDELTYDYLFDPDEPDEFKVPCLCKAPNCRKFMN | 1065 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g02283 | 1065 | CDD | SET_SETD1-like | 910 | 1061 | - | - | |
Car05g02283 | 1065 | SMART | set_7 | 923 | 1046 | IPR001214 | GO:0005515 | |
Car05g02283 | 1065 | Gene3D | - | 242 | 348 | - | - | |
Car05g02283 | 1065 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 1065 | IPR025780 | - | |
Car05g02283 | 1065 | ProSitePatterns | Zinc finger PHD-type signature. | 635 | 680 | IPR019786 | - | |
Car05g02283 | 1065 | SMART | PHD_3 | 440 | 492 | IPR001965 | - | |
Car05g02283 | 1065 | SMART | PHD_3 | 745 | 801 | IPR001965 | - | |
Car05g02283 | 1065 | SMART | PHD_3 | 634 | 681 | IPR001965 | - | |
Car05g02283 | 1065 | Pfam | SET domain | 934 | 1039 | IPR001214 | GO:0005515 | |
Car05g02283 | 1065 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 686 | 801 | IPR034732 | - | |
Car05g02283 | 1065 | CDD | PHD_TCF19_like | 441 | 491 | - | - | |
Car05g02283 | 1065 | CDD | ePHD_ATX3_4_5_like | 689 | 800 | IPR041955 | - | |
Car05g02283 | 1065 | Pfam | PHD-finger | 440 | 493 | IPR019787 | - | |
Car05g02283 | 1065 | ProSiteProfiles | Zinc finger PHD-type profile. | 438 | 494 | IPR019787 | - | |
Car05g02283 | 1065 | PANTHER | PHD FINGER PROTEINS | 1 | 1065 | - | - | |
Car05g02283 | 1065 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 627 | 683 | IPR013083 | - | |
Car05g02283 | 1065 | ProSiteProfiles | Zinc finger PHD-type profile. | 632 | 683 | IPR019787 | - | |
Car05g02283 | 1065 | Gene3D | SET domain | 833 | 1065 | IPR046341 | - | |
Car05g02283 | 1065 | SUPERFAMILY | FYVE/PHD zinc finger | 633 | 697 | IPR011011 | - | |
Car05g02283 | 1065 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 434 | 496 | IPR013083 | - | |
Car05g02283 | 1065 | ProSiteProfiles | PWWP domain profile. | 247 | 316 | IPR000313 | - | |
Car05g02283 | 1065 | SUPERFAMILY | SET domain | 912 | 1065 | IPR046341 | - | |
Car05g02283 | 1065 | SUPERFAMILY | Tudor/PWWP/MBT | 240 | 344 | - | - | |
Car05g02283 | 1065 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 684 | 803 | IPR013083 | - | |
Car05g02283 | 1065 | SUPERFAMILY | FYVE/PHD zinc finger | 439 | 495 | IPR011011 | - | |
Car05g02283 | 1065 | Pfam | PHD-finger | 647 | 681 | - | - | |
Car05g02283 | 1065 | ProSiteProfiles | Post-SET domain profile. | 1049 | 1065 | IPR003616 | - | |
Car05g02283 | 1065 | CDD | PHD_ATX3_4_5_like | 634 | 680 | IPR042011 | - | |
Car05g02283 | 1065 | Pfam | PHD-zinc-finger like domain | 688 | 800 | - | - | |
Car05g02283 | 1065 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE ATX4 | 1 | 1065 | - | - | |
Car05g02283 | 1065 | Pfam | PWWP domain | 248 | 341 | IPR000313 | - | |
Car05g02283 | 1065 | ProSiteProfiles | SET domain profile. | 923 | 1040 | IPR001214 | GO:0005515 | |
Car05g02283 | 1065 | SMART | PostSET_3 | 1049 | 1065 | IPR003616 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g02283 | Car-Chr5 | 68048165 | 68056659 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g02283 | 635 | 800 | C2H2 Transcription Factor Family | AT3G14740 | 33.526 | 8.48e-21 | 93.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Car05g02283 | zf-HC5HC2H_2 | 1.3e-27 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g02283 | - | - | aprc:113853254 | 1804.65 |