Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02279 atgcatgaattataccatcagtatgtcaattctaaatttggtgagccaattgagtattcggcataccttgatgttttttcggaaacagataaggttccacgaaaaatgaaaacgACGAGgcagtacagggagtacttggggaatctgttagagtatctgatatattttttccagcggacagaacccctgcaagatctcgatcgaatcttttcaaagGTAACAGCCGAGTttgaagaaaattgggctagtggaatggttcaagggtgggagaatgacaatcaggaaaatggacatgtagctagtcagcacactgcaattgatcttgattattacagtacagttgaagagcttatggaagtgggtcctgaaaggttaaaggagGCACTGGCTGCATTGGGACTTAAGAGTGGTGGCACTGTTCAGCAACGTGCAGAGAGGCTCTTCCTCACAAAGCATACACCTCTTGAAAAGTTGGACAAGAAGCATTTTGCCAAGGGGGCACATGGTTTAGAAAAAAATGGGGTTGCTGCTGCTTCACAAGAAGGAAATTTAAAAGAAATTGCATTAATGGAGGCCAAAATGAATAAACTGTGTGATTTGTTAGACGAGACAATTGCTCGAACAAAAGACAATGTTATAAAGAAGCAAGCCTTAACTTATGAGGAAATTGAAGCAGAACGTGAGGAGGAAGAGACACAAGAGGATTCTGAAAGCGAAGATGATGAGCAGCAGATTTATAATCCCTTAAAATTACCAATGGGATGGGATGGGAAGCCTATACCTTATTGGCTGTATAAGCTACATGGTCTTGGTCAGGAATTTAAGTGTGAGATTTGTGGGAACTACAGTTATTGGGGGCGTCGTGCTTTTGAACGACATTTTAAAGAATGGCGTCATCAACATGGGATGCGGTGTCTTGGTATTCCAAATACAAAGAACTTCAATGAAATCACATCAATTGAGGAAGCAAAGGAGCTCTGGAAGAAGATACAGCAGAGACAAGGAGTGAACAAGTGGCGCCCAGATCTCGAGGAAGAGTATGAAGACAAAGAAGGCAACATCTATAATAAGAAGACATACACTGATTTACAACGCCAGGGACTGATATGA 1110 0.2838 MHELYHQYVNSKFGEPIEYSAYLDVFSETDKVPRKMKTTRQYREYLGNLLEYLIYFFQRTEPLQDLDRIFSKVTAEFEENWASGMVQGWENDNQENGHVASQHTAIDLDYYSTVEELMEVGPERLKEALAALGLKSGGTVQQRAERLFLTKHTPLEKLDKKHFAKGAHGLEKNGVAAASQEGNLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYEEIEAEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02279 369 PANTHER SPLICING FACTOR SF3A-RELATED 1 369 - -
Car05g02279 369 Pfam SF3a60/Prp9 C-terminal 250 369 IPR024598 GO:0000398|GO:0003723|GO:0005681
Car05g02279 369 PANTHER BNAA03G01920D PROTEIN 1 369 - -
Car05g02279 369 Coils Coil 213 240 - -
Car05g02279 369 Pfam Replication stress response SDE2 C-terminal 85 165 - -
Car05g02279 369 ProSiteProfiles Zinc finger matrin-type profile. 274 305 IPR000690 GO:0003676|GO:0005634|GO:0008270
Car05g02279 369 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02279 Car-Chr5 68002501 68010590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02279 1 369 C2H2 Transcription Factor Family AT5G06160 75.676 0.0 558