Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02270 ATGGTATGCGGCAGGTGTGTGAGTTCTATTTTTGTTCAAGCTCGATTTTTCACAAAGAGAGTGCCGCAATTCAACTACGTTGGGAACAACAAGGGTTTGCCACCAAATCGTGTGTTTAAGAGGTACATAGGGATGATGGTTGATACAGGTTCTATGTCAACAAGGGCAGGACCAAATGTCGATATGGTTTCTCACAAAGATGATGATGCTGGtggttctggttctggttctggttcaggttctggttctggtGCTAATGGTGGCTTTGTCACTGGTGGATGGAAAAGTCAAGATGAAAGACTTAGCTGTGGGTATTCAAGCTTTAGGGGGAAGAGGGTGACCATGGAAGACTTCTATGATGTTAAGACATCAACCATTGATGGTCGTTCTGTGTGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGATCATCTATTTGAGAATCTCATGAAGCATCCAAAGTTTTTGACGGATACCAAATTGGCTATAAGTGAAACATATCAGAAGACCGATGCTGAGTTTCTGGACTCTGAAAAAGATACTTTCCGGGATGACGGATCTACTGCTTCAACCGCTGTTTTGGTTGATAACCATCTTTATGTTGCTAATGTTGGAGATTCCAGAACTGTAATATCAAAAGCTGGAAAGGCAATTGCTCTCTCTGAGGATCATAAACCTAATAGAAGTGACGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACGTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCATTTGGCAACCGTATGTTGAAGCCATTTGTTGTAGCGGAACCTGAAATCCAGGACCAGAAAATAGATGCAGAAACTGAGGTGCTTGTTCTTGCGAGTGATGGACTCTGGGATGTAGTACAAAATGAGGATGCTGTTTCACTTGCACGCACAGAAGAGGCAGCCGAGGCAGCCGCTCGCAAGTTAACAGAGGCCGCCTTCAACCGCGGTAGTGCAGATAACATTACTTGCATTGTGGTAAGATTCCATCATGAAAAAGCACACCCAGCTAATCCTGATAAAGCTGGTCCAGCTAGCAGTCAGCATGAGTAG 1110 0.4315 MVCGRCVSSIFVQARFFTKRVPQFNYVGNNKGLPPNRVFKRYIGMMVDTGSMSTRAGPNVDMVSHKDDDAGGSGSGSGSGSGSGANGGFVTGGWKSQDERLSCGYSSFRGKRVTMEDFYDVKTSTIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLMKHPKFLTDTKLAISETYQKTDAEFLDSEKDTFRDDGSTASTAVLVDNHLYVANVGDSRTVISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQKIDAETEVLVLASDGLWDVVQNEDAVSLARTEEAAEAAARKLTEAAFNRGSADNITCIVVRFHHEKAHPANPDKAGPASSQHE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02270 369 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 79 355 - -
Car05g02270 369 SUPERFAMILY PP2C-like 99 349 IPR036457 -
Car05g02270 369 SMART PP2C_SIG_2 98 348 IPR001932 -
Car05g02270 369 PANTHER ALPHABET, ISOFORM E-RELATED 79 355 - -
Car05g02270 369 CDD PP2Cc 102 348 IPR001932 -
Car05g02270 369 ProSiteProfiles PPM-type phosphatase domain profile. 102 348 IPR001932 -
Car05g02270 369 SMART PP2C_4 92 346 IPR001932 -
Car05g02270 369 Pfam Protein phosphatase 2C 104 341 IPR001932 -
Car05g02270 369 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Car05g02270 369 Gene3D - 93 355 IPR036457 -
Car05g02270 369 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02270 Car-Chr5 67907447 67919369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02270 39 369 PP2C-type Phosphatase Gene Family AT5G53140 69.789 7.02e-166 468