Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02269 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGAGAATATATTGGTGCAAAGAAATTTGCTCTCAAGGCTCAAAATTTGTATCCTGATTTGGAGGATATTTCCCAGTTTTTGACTACTATTGATATTTATATCTCTGCTGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGACGAAGAGATTGTTAGAAGGCAGTACAGGAAGCTAGCTCTCACCCTTCACCCTGACAAAAACAAGGCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTGTGAAAGGCTTCCAACATAATACTCCCAACCGTGCTGGGCCTCCATCCGGTGCACCAAGTTCAAATGGTTATTATCATTATAAAAAGAATGCAACTTCAAATGCAAGGACTGGAAATAATAATGCTCGGGCACCTGCAACTTCGGTCCCTCCACAGAAAAAGGCTGAAACCTTTTGGACTATCTGTAATCGGTGCAGAACACATTATGAATATCTCAGGGTTTATTTGAATCACACCCTTCTATGTCCAAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCTCCTCCCAATGTTTTCAAGCCATCAAGTTTGTCCTCCCATCAACAGCATCAGAGTTCTCGACGTCAAGCTGGAAGTAATAATACAAACCTTCAGTGGGGTTCTCACTCCAGAATGGCTGGTTTTGGTAGCACTGATGGATCGTCATCTGTTGCTGCTCAAGCTGCGAGTGTTGTGCAGAAGGCAAGTGAGAAAGTGAAGAGAGAGGGAGCACCATCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAGGGCTGATGGCTCTTTTCATAAAGTTGAAAAACCTATGAAGAAAATGAAGACAGATGATATTCGCATTAATGGTTATGCAGGATATATGGCAAGTCATATGGCTACGGGACATGGAGCAGCAGGTTTGGGCAGTTCCTCTGAATCAGGAAAGGCCAACATCGAAACAGAAAGGATTTATGGGTTTTCAGGTCTTGCTGGAAAGCATTACAGCACGAGAGAGTTGCCATTGTTTGACTTACGAAACATGTTGATCAATAAGGCACAAAATGAAATTCGTAAGAAACTTGAAGAATGGAGGTTAACGGCTGAAGCTAAAGTTATCAACAAGGACAAAGAGAATAAGAGGCACAAAAATACATTGAATGACAAAACAACTGTTTCAGAGAAGTATCAACAGTCCAATGTTAATGGTAATAAGCATTTTGATATTGATTCTTTACCTGTCACGTCTGATGATACAGTTAAGAAGAGCCAAGCCTATGTTACAATCAATGTTCCAGATCCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAGTTCCTTTGCAGAGGACCAGGTATGGGCTGCTTATGATGATGATGATGGAATGCCTAGATATTATGCTAGAATTCACAAAGTGATCTCAATAGAGCCGTTTAGAATGCGGATCAGTTGGCTTAACTCTCGAAACAACAGTGAATTGGGCCCTATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACCGGCAAGCATGAAGTAACTGAATCATTAAATTCATTTTCGCACAAGGTTAGGTGGACTAAAGGCACTAGAGGAGTTGTCCGCATCTTTCCGGGAAAGGGGGAGGTCTGGGCTCTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCAGATGAAGTGATACACAAGTATGACATGGTGGAGGTGCTTGATGATTTCAGTGAAGAGCAAGGTATATCAGTTACTCCCCTTGTTAAGGTTTCTGGCTTTAGGACAGTATTTCAAAGGCATAAGGACCAGAATGAGGTTAAGAGGATTCCTAAAGAGGAGATGTTTCGATTCTCTCACCAGGTTCCTAATCACTTGCTCACCGGCAAAGAAGCTCAGAATGCTCCAATGGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGACAGAAACAGAAGCTAATGAGTCAACAGGTAATAAT 2142 0.4183 MMECNKDEAVRAKEIAERKFSEREYIGAKKFALKAQNLYPDLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEEIVRRQYRKLALTLHPDKNKALGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSVKGFQHNTPNRAGPPSGAPSSNGYYHYKKNATSNARTGNNNARAPATSVPPQKKAETFWTICNRCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSSLSSHQQHQSSRRQAGSNNTNLQWGSHSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKRADGSFHKVEKPMKKMKTDDIRINGYAGYMASHMATGHGAAGLGSSSESGKANIETERIYGFSGLAGKHYSTRELPLFDLRNMLINKAQNEIRKKLEEWRLTAEAKVINKDKENKRHKNTLNDKTTVSEKYQQSNVNGNKHFDIDSLPVTSDDTVKKSQAYVTINVPDPDFHNFDLDRAESSFAEDQVWAAYDDDDGMPRYYARIHKVISIEPFRMRISWLNSRNNSELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLDDFSEEQGISVTPLVKVSGFRTVFQRHKDQNEVKRIPKEEMFRFSHQVPNHLLTGKEAQNAPMGCRELDPAATPLDLLQTETEANESTGNN 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02269 714 Gene3D DnaJ domain 64 176 IPR036869 -
Car05g02269 714 SMART dnaj_3 66 123 IPR001623 -
Car05g02269 714 PANTHER BNAC03G44070D PROTEIN 2 709 - -
Car05g02269 714 MobiDBLite consensus disorder prediction 233 273 - -
Car05g02269 714 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Car05g02269 714 CDD DnaJ 67 120 IPR001623 -
Car05g02269 714 PRINTS DnaJ domain signature 103 123 IPR001623 -
Car05g02269 714 PRINTS DnaJ domain signature 69 87 IPR001623 -
Car05g02269 714 PRINTS DnaJ domain signature 87 102 IPR001623 -
Car05g02269 714 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Car05g02269 714 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Car05g02269 714 Pfam DnaJ domain 67 128 IPR001623 -
Car05g02269 714 MobiDBLite consensus disorder prediction 232 273 - -
Car05g02269 714 MobiDBLite consensus disorder prediction 132 179 - -
Car05g02269 714 PANTHER HEAT SHOCK PROTEIN-LIKE 2 709 - -
Car05g02269 714 MobiDBLite consensus disorder prediction 129 182 - -
Car05g02269 714 Pfam Domain of unknown function (DUF3444) 474 680 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02269 Car-Chr5 67902011 67904152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02269 5 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.472 2.30e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02269 - - mtr:MTR_3g091040 1240.71