Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02263 ATGGGAGATTCAAAGAGCCTTATACACGAGCTACTACAAGGATTGGAGTTGACAAGGCAGCTTCAACTCTATCTCAACGTGCCTTCTTCTTCCTCTAATGAAACCCGTGAATTATTGATCCAACAAATCATAACAACATTTGAAAAAGCACTTCAAATGGTAAACCGTAAAGGACACGTGGCTGAATCCTCACAACAACAACAACCGGCAAGGACGGTTGGAATCCGAATGTTGGACTCACCGCCTTTAAGCTGTAGTCCCAAAAGTGAAGACTCAGACAGAGATTTTCAAGACCATCACCGCAATGCTTTCAAAAAAAGAAACACTATGCCAATTAGATGGACAAAAAAAATTCGAGTTACACCAGGAGTGAGAGTGGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGGCAAAAAGAAATTCTTGGAGCATTACATCCAAGAGGGTATTACAGATGCAGTCACAGAAACGTTGAAGGGTGTTTGGCAACAAAGCAAGTACAAAGATCTGATGAAGACTCAACTGTGTTCGAAATCACTTACCGAGGAAACCACACTTGCACAATGGAATCCAATGTGGTAGCTCTTCCTACATTAAATCCAAATGAAAACCAAGAAACAAATGTAAACACAAATCTTCAAAGTATGCGAACAGGACTAAGAGTCCAAACAGAGAACCTAGATTTCCTCGACCAACCATTTGGTTCAATATTCTCTTCCCCTGCTGTACTTGAAAGCAGTTTTGTTGAAAACTTCAATTCTCCTTCTGCGAATTCAGGAATAAGCCAGTTTTCGATGTCACCGAATTCAAGTGTGTTCCCTAATATCACAACTTCTGTTGCAAACACACCAACTACTTCGTTAGAGTTTCCAATTGACCAATTTGAATTTGACAGACATAACTTCACATTCGATAACTCGCCATTTTTTTGA 942 0.3992 MGDSKSLIHELLQGLELTRQLQLYLNVPSSSSNETRELLIQQIITTFEKALQMVNRKGHVAESSQQQQPARTVGIRMLDSPPLSCSPKSEDSDRDFQDHHRNAFKKRNTMPIRWTKKIRVTPGVRVEGPLDDGYSWRKYGQKEILGALHPRGYYRCSHRNVEGCLATKQVQRSDEDSTVFEITYRGNHTCTMESNVVALPTLNPNENQETNVNTNLQSMRTGLRVQTENLDFLDQPFGSIFSSPAVLESSFVENFNSPSANSGISQFSMSPNSSVFPNITTSVANTPTTSLEFPIDQFEFDRHNFTFDNSPFF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02263 313 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02263 313 SUPERFAMILY WRKY DNA-binding domain 128 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02263 313 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02263 313 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 3 310 - -
Car05g02263 313 Gene3D WRKY domain 120 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02263 313 MobiDBLite consensus disorder prediction 77 96 - -
Car05g02263 313 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02263 313 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 310 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02263 Car-Chr5 67815277 67817206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02263 3 244 WRKY Transcription Factor Family AT4G23810 36.207 4.53e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car05g02263 WRKY 2.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02263 - - gmx:100776906 367.851