Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02258 ATGGACAACAAGATGTTCCTGTTGTTCATTTTTTCAGCAGTGTTGGTTAGTGTTGAAGCTGAACCAGTACAAGATAAACAAGCTTTACTTGATTTCCTTAACAGCATGAATCATTCACCACATCTCAATTGGGATGAGAATTCTTCTGTTTGTCAAACATGGAGAGGAGTAACCTGCAACACTGATGAGTCTCGAGTCATCGCGATTCGATTGCCTGGAGCTGGTTTAAGTGGTTTAATCCCACCAAACACTCTAACTCGCCTCTCAGCTCTTGAAACCGTTAGTCTTAGATCAAATGGTATAACTGGTTTTTTCCCTGATGGTTTTTCTGAGCTGAAAAACTTGACAAGTCTTTATCTTCAATCAAACAAGTTTTTCGGACCATTGCCATTGGATTTTTCTGTTTGGAATAATCTCACTGTTGTTAATTTGTCCAATAATTCATTTAATGGTAGCATCCCTTATTCAATTTCAAATCTAACTCAATTAACTTCATTAGTCCTTGCAAATAACTCTCTTTCTGGTGTGATTCCTGATATTTATATTCCTAGTTTGCAAGAGCTTAATTTGGCAAACAATAAACTTAATGGTGTTGTTCCAAAATCACTTCTTAGATTTCCGAGTTGGGCTTTTTCTGGTAACAATCTTACATCAGTAACTACAGTTTCATCACTTTCTCCAGCTTTTCCTATGAAACCACCTTATAATGCCATTCCATCAAAGAAAAACAAAGGACTCAATGAAACTGCATTGTTGGGAATCATCATTGGTGTTTGTTCACTTGGATTTGCAGTGATTGCCGGTGTTATGGTTCTGTGCTGCTATGACTATGCAGCAGGTGTAGTTGAACCTGTGATGAAGTCAAAGAAAAATGAAGTTTCTTCGAAAGCAGAATCTTCCGGAAGCCGAGAAGATAAAAACAAAATTGTGTTTTTTGAGGATTGTAAGCTTGCATTTGATTTAGAGGATCTTTTGAGAGCTTCTGCTGAGATACTTGGAAAGGGTAATTTTGGTACAACATATAAGGCTGCTTTAGAGGATGCAACCACTGTGGTAGTGAAGAGGTTGAAAGAGGTTAGCGTTGGGAAAAGGGAGTTTCAACAACAGATGGAAGTGGTAGGGAAAATTAAGCATGATAATGTTGATACATTAAGAGCATACTATTATTCAAAGGATGAGAAACTTGTAGTATCTGATTATTATCAACAAGGCAGTGTTTCTTCCATGTTACATGGCCAAAGAAGAGAAGGAAGAACTTCTCTAGACTGGGATAGCCGTTTAAAGATTGCAATTGGTACATCAAGAGGCATTGCTCACATTCATACTCAACAAGGTGGGAAACTCGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAATTCACAAGGATATGGTTGTGTATCAGACATAGGCTTAGCAACATTGATGAGTCCAATTCCTTCACCAGGAACAAGAGCAACAGGGTACCGTGCTCCTGAAGTAACCGACACTCGTAAAGCGACACATTCATCTGATGTATACAGTTTCGGAGTGCTATTACTTGAGCTTCTAACTGGGAAATCACCTATATATACAACAGAAGGTGAACAAGTTGTTCAATTGGTTAGATGGGTGAATTCTGTTGTCAGAGAGGAATGGACTGCAGAGGTTTTTGATGTGGAGCTTTTGAAGTATCCAAATATTGAAGAAGAAATGGTAGAGATGTTACAGATAGGGATGGCTTGTGCAGCAAGAATGCCAGATCAGAGACCGAAAATGGACGAAGTTGTGAGAATGATGGAGGGGATTCGTCGTACCGAAAATCGACCTTCATCTACTGAGTCTAGATCAGAAGCTTCTACTCCAACTATTGATGCAACTTAA 1866 0.3875 MDNKMFLLFIFSAVLVSVEAEPVQDKQALLDFLNSMNHSPHLNWDENSSVCQTWRGVTCNTDESRVIAIRLPGAGLSGLIPPNTLTRLSALETVSLRSNGITGFFPDGFSELKNLTSLYLQSNKFFGPLPLDFSVWNNLTVVNLSNNSFNGSIPYSISNLTQLTSLVLANNSLSGVIPDIYIPSLQELNLANNKLNGVVPKSLLRFPSWAFSGNNLTSVTTVSSLSPAFPMKPPYNAIPSKKNKGLNETALLGIIIGVCSLGFAVIAGVMVLCCYDYAAGVVEPVMKSKKNEVSSKAESSGSREDKNKIVFFEDCKLAFDLEDLLRASAEILGKGNFGTTYKAALEDATTVVVKRLKEVSVGKREFQQQMEVVGKIKHDNVDTLRAYYYSKDEKLVVSDYYQQGSVSSMLHGQRREGRTSLDWDSRLKIAIGTSRGIAHIHTQQGGKLVHGNIKASNIFLNSQGYGCVSDIGLATLMSPIPSPGTRATGYRAPEVTDTRKATHSSDVYSFGVLLLELLTGKSPIYTTEGEQVVQLVRWVNSVVREEWTAEVFDVELLKYPNIEEEMVEMLQIGMACAARMPDQRPKMDEVVRMMEGIRRTENRPSSTESRSEASTPTIDAT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02258 621 SUPERFAMILY Protein kinase-like (PK-like) 330 595 IPR011009 -
Car05g02258 621 Gene3D Transferase(Phosphotransferase) domain 1 402 617 - -
Car05g02258 621 Gene3D Phosphorylase Kinase; domain 1 290 400 - -
Car05g02258 621 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02258 621 SUPERFAMILY L domain-like 25 209 - -
Car05g02258 621 Gene3D Ribonuclease Inhibitor 135 230 IPR032675 -
Car05g02258 621 CDD STKc_IRAK 332 597 - -
Car05g02258 621 ProSiteProfiles Leucine-rich repeat profile. 184 205 IPR001611 GO:0005515
Car05g02258 621 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Car05g02258 621 PANTHER OS05G0588300 PROTEIN 7 619 - -
Car05g02258 621 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Car05g02258 621 MobiDBLite consensus disorder prediction 596 621 - -
Car05g02258 621 Pfam Leucine Rich Repeat 184 212 IPR001611 GO:0005515
Car05g02258 621 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Car05g02258 621 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Car05g02258 621 PANTHER LRR RECEPTOR-LIKE KINASE 7 619 - -
Car05g02258 621 Pfam Protein tyrosine and serine/threonine kinase 330 593 IPR001245 GO:0004672|GO:0006468
Car05g02258 621 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Car05g02258 621 MobiDBLite consensus disorder prediction 607 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02258 Car-Chr5 67738028 67741973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02258 14 617 Receptor kinase-like Gene Family AT4G23740 56.381 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car05g02258 PK_Tyr_Ser-Thr 8.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02258 - - gmx:100813065 934.865