Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02236 ATGTCGAATACTGCTGGTCAGGTCATCAAATGCAAAGCTGCGATTGCATGGGAGGCGGGGAAGCCGCTGGTGATAGAAGAAGTGGAGGTGGCGCCACCACAAGCCGGTGAAGTCCGTCTTAAGATACTCTTCACCTCCCTTTGTCACACTGATGTTTACTTCTGGGAAGCTAAGGGTCAGACTCCACTGTTTCCTCGTATATTTGGTCATGAAGCTGGAGGGATTGTGGAGAGCGTAGGGGAGGGTGTGACTCATCTGGAACCAGGGGATCATGCTCTGCCTGTATTCACTGGGGAGTGTGGGGAATGTCCACATTGTAAGTCTGAGGAAAGCAACTTGTGTGATCTTCTTAGGATCAACACAGATAGGGGTGTCATGATCAATGATAACCAGTCAAGATTCTCTATCAAGGGACAGCCCATACACCATTTCGTCGGTACCTCCACATTCAGTGAGTACACTGTGGTTCATGCTGGATGTGTTGCGAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTATTCTCAGTTGTGGAATATGCACAGGTCTTGGTGCTACTATCAATGTTGCTAAACCGAAACCGGGTTCCTCTGTTGTTATCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTTGAATTAGCTAAGAAGTTTGGGGTCAATGAGTTTGTAAACCCAAAAGAGCATGACAAACCCGTGCAACAAGTAATTGCTGAAATGACCAACGGAGGCGTGGATCGTGCTATTGAATGTACTGGCAGTATCCAAGCTATGATCTCAGCATTCGAATGTGTCCACGATggttggggtgttgctgtacttgttggtgtACCAAGCAAAGATGATGCATTCAAAACTCATCCTGCGAATTTCTTGCATGAGAGGACTCTTAAGGGTACCTTCTATGGCAACTTCAAACCTCGCACCGATCTTCCAAATGTTGTAGAGAAATACATGAAAGGGGAGCTGGAACTTGAAAAGTTCATTACTCACACAATACCATTCTCAGAGATTAACAAAGCTTTTGATTACATGCTGAAGGGGGAGTCCATTCGTTGTATCATTCGCATGGATGAGTAA 1143 0.4488 MSNTAGQVIKCKAAIAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLEPGDHALPVFTGECGECPHCKSEESNLCDLLRINTDRGVMINDNQSRFSIKGQPIHHFVGTSTFSEYTVVHAGCVAKINPAAPLDKVCILSCGICTGLGATINVAKPKPGSSVVIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAIECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPANFLHERTLKGTFYGNFKPRTDLPNVVEKYMKGELELEKFITHTIPFSEINKAFDYMLKGESIRCIIRMDE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02236 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Car05g02236 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Car05g02236 380 Gene3D - 19 370 - -
Car05g02236 380 CDD alcohol_DH_plants 9 377 - -
Car05g02236 380 Gene3D - 183 321 - -
Car05g02236 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
Car05g02236 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Car05g02236 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
Car05g02236 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Car05g02236 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Car05g02236 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02236 Car-Chr5 67593404 67596075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02236 37 370 Monolignol Biosynthesis Gene Families AT1G72680 25.223 1.17e-13 69.7