Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02231 ATGGTACCTCCGGGTCCAGGGACACCGACTCCCATTGGCGGTGCTCAGTCTCTCTCGCCTTCTCTTTTGAGATCAAATTCTGGAATGTTAGGAGCTCAAGGGGCTCCCATGCCTTCGCAGACGTCTTTCCCTTCACTTGTGTCTCCTCGTTCTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATATAACTTCTATACTGAATCAATCTTTCCCAAACGGAGTTCCAAATCATGGACTCACTGGTCAAGGAAGTAGCCAGCGTGGAGGGATTGAAACTGGAGCTGAAACAGGCCAACTTTCCAGTGTTGGCAATGGAACGAGCTTCACCAATTCTCCATCCTCATTTGTACAATCAAATATGACGATTGCGGGTTCCTCTGGTCAAGTTCAGGGTCAACAATTTTTGAACGCCTCTAGCAACCAGCTGTTGCCAGATCATCAACTTTCTCAACAGCTTGAACCTCGAAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCTCTTCTCCTCTGAATACACAGCAGCAACCGCAGCAGCATTTTCAATCAATGCGAGGAGGAATAGGTGGAATGGGACCAGTTAAGTTAGAGCCCCAGGTAAACAACGATCAACTTGGACAGCAGCAGCAGCTGCAGTCAATGAGGAATCTTCCTCCAGTGAAAATGGAACAACAACAAATTCAATCAATGAGAACTCTGGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAACCGTTATTCTtgcagcaacaacaacagcagcaacaatttctccacatgtcgagacagtcttctcaagctgctgctGCTCAGATCAATCTTTTGAACCATCACAGGCTTTTacagctacaacaacaccagcaacaacaacTCTTAAAGGCAATGCCTCAACAAAGAGCTCAATTACCACAACAATTTCAACAGCAAAGTATGCCTATGAGGTCTCCTGTGAAACCGGCATATGAACCAGGGATGTGTGCTAGGCGGCTGACACACTACATGTATCAGCAACAGCATAGACCTGAGGATAACAACATTGAGTTTTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCTAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTCTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATCGTTCTAGACTATGCAAAAGCCATACAAGAAAGTGTCTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGATTGGAGCGGTTGCTCAAAAATACCAGGCTTTAACTCAAAATGCAACACCCAATACATCTGCTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCTTCAGCTCGTCAATTGGCTAAAGCCCTAGAAGTTCCATTAGTTAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGCATGAAAGACTTGATAGATTACAGTAGAGAAACAGGGACTGGACCTATGGAGAGCTTAGCCAAATACCCTCGGAAAACAAGTAATTCGTGTGGAGTTCGTAATCTAGCTCAACATGAAGACCAATTAAAACAACAGCAGCAAATGACTGTCAATAACTCAAATGGCGATCCAAACCCAGTGCAAGCTGCTGCCATGCAAATTGCTTCAAGCAATGGTATGGTTAGTGTAAATAGTTCTGTCAACTCAGGGTCCGCATCCACAACCACAAGCACTATTGTTGGACTTCTCCACCAAAACTCTGTGAATTCTAGACAAAACTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCCTCCAGTACCGTGCCACAGGCCCAGCCAAACTCATCCTCTTTTCAGTCACCTACACAATCCTCATCTAATAACCCCCAACAAACAACTCACTCTACTTTAACGCCTCCCAATCAAATGAATACAACAAACTCACCAGCTAATATTTCGATGCAACAACAACATCAATATCAACCGTCTCTTTCTGGTGATCCTGACCCAAGCGATGATCAAAACTCAGTCCAGAAAATCCTACATGAGATGATGATGTCCTCCCAGATGAATGGTACAGGGGGAATGGCTGGTGTTGGTTCTCTAGGAAACGACTTGAAGAATGTAAATGGTATAATGCCAACGAGTGCCAATGCAGGGCTGAATGGTGATAATGGCACAGTCAACAGTAATACAGGTGTTGGGGCTGGTAGTTATGGAACCATGGGGTTTGGTCAATCCACTATGCCTAATGGAATCAGAGGTACTACGATAAATAATTCAGTCATGAATGGAAGAGGAGGAATGGCGTCTTTTTCCCGGGATCAAGCTATGAATCATCAACAGGATCTGTCGAACCAACTACTCAGTGGGCTAGGAACAATAAATGGTTTTAGTAATTTTCAATTTGATTGA 2688 0.4204 MVPPGPGTPTPIGGAQSLSPSLLRSNSGMLGAQGAPMPSQTSFPSLVSPRSQFNNMNILGNMSNITSILNQSFPNGVPNHGLTGQGSSQRGGIETGAETGQLSSVGNGTSFTNSPSSFVQSNMTIAGSSGQVQGQQFLNASSNQLLPDHQLSQQLEPRNFQHSQQSMQQFSSPLNTQQQPQQHFQSMRGGIGGMGPVKLEPQVNNDQLGQQQQLQSMRNLPPVKMEQQQIQSMRTLAPVKMEPQHCDQPLFLQQQQQQQQFLHMSRQSSQAAAAQINLLNHHRLLQLQQHQQQQLLKAMPQQRAQLPQQFQQQSMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQIGAVAQKYQALTQNATPNTSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKYPRKTSNSCGVRNLAQHEDQLKQQQQMTVNNSNGDPNPVQAAAMQIASSNGMVSVNSSVNSGSASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNSSSFQSPTQSSSNNPQQTTHSTLTPPNQMNTTNSPANISMQQQHQYQPSLSGDPDPSDDQNSVQKILHEMMMSSQMNGTGGMAGVGSLGNDLKNVNGIMPTSANAGLNGDNGTVNSNTGVGAGSYGTMGFGQSTMPNGIRGTTINNSVMNGRGGMASFSRDQAMNHQQDLSNQLLSGLGTINGFSNFQFD 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02231 895 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 895 - -
Car05g02231 895 Pfam LIM-domain binding protein 333 587 IPR029005 -
Car05g02231 895 MobiDBLite consensus disorder prediction 296 321 - -
Car05g02231 895 PANTHER LIM DOMAIN-BINDING PROTEIN 1 895 IPR029005 -
Car05g02231 895 MobiDBLite consensus disorder prediction 159 199 - -
Car05g02231 895 MobiDBLite consensus disorder prediction 671 766 - -
Car05g02231 895 MobiDBLite consensus disorder prediction 76 116 - -
Car05g02231 895 MobiDBLite consensus disorder prediction 296 318 - -
Car05g02231 895 MobiDBLite consensus disorder prediction 1 48 - -
Car05g02231 895 MobiDBLite consensus disorder prediction 159 186 - -
Car05g02231 895 MobiDBLite consensus disorder prediction 12 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02231 Car-Chr5 67516741 67521669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02231 1 895 C2H2 Transcription Factor Family AT1G43850 58.130 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02231 - - gmx:100799771 1330.85