Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02229 ATGTATAGGACAGATGCTTATTCCAGCCAGAGTTACAAGAAGTACTTCCATGACTTACAAACAGAAGAACTGATAGAACCATCTAGTTCTGAGATCTCTACAACTTCAATTGACCAAGATGGTGCCTCTTCTTCTTACCAGCTTATAGCTAGTTCAGGAGCTTCACTGCTTACTAATAAACCATTTGATACTTTTTTGATGTCAACGAGGAATCACAGTGCTGATAAGTCCAATTTCGGATCAGATTCGATGGAAAATCGAAGCGTGGATTCAATTGAAATTGATAGTGAAATGAGATCAAAACTACAAGCATTGGAAAAGGCATTACTTGATGATAGTGAGGCTGATGAAGAAGAGGAATATGTGACTTCTCAAAGCATGGAAATTGATTCAATTCAGAATATGCTAATCAATGACCATGATTCACCGAAGGAGTATTCATCTTCAGATTCCAATATTAGCACAATCAGCATCACCAATACCAAAGAAATAACGCGAATTTCTCGAACCCCGAAGCAACTTCTTTATGAATGTGCTAATGCAATTTCAGAAGGAAATAAAGAGGAAGCAACGTCGATGATAAACAGTCTCCGAAAAATGGTATCAATCCAAGGAGAGCCTTCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTCGCTGCTCGCCTCGCTGAATCCGGAAAAAGTATTTATAGAGCTTTAAGATGCAAAGAACCACCTTCTTCCGACCGTTTAGCAGCAATGCAGATACTTTTTGAGGTTTGTCCATGCTTTAAATTCGGGTTTATCGCCGCTAACAACGCAATTACAGAAGCAGTTAAAGATGACAGAAAGGTTCATATAATAGATTTTGACATCAATCAAGGAAGTCAATACATAAACCTTATTCAAACACTTGCATCAAGGCCTTGTAAGCCATCTCATGTTAGATTGACAGGAATTGATGATCCTGAATCCGTGCAGCGATCTATTGGAGGACTAAACATCATAGGACAAAGACTAGAAAAACTAGCAGAATCACTCGGTTTGTCATTTGAATTTCGAGCGGTGGCATCGAGGACATCGATTGTCACTCCATCCATGCTCAAGCTCAACTGTTGTCCTGATGAAGCTCTTGTTGTAAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCCACGATTAACGAAAGAGACCAGCTTCTTCGATTGGTAAAGAGCATGAATCCGAAGATTGTAACCGTCATCGAACAAGATGTAAACACTAATACCACTCCTTTCTTGCAGAGGTTTGTTGAAGCTTACAATTACTACTCAGCTGTGTTTGAGTCACTTGATGTTACACTTCCTAGAGAGAGTCAGGATAGGATGAATGTTGAAAGGCAATGCTTAGCAAGAGACATTGTTAATACTGTTGCTTGTGAAGGTGAGGATAGGATAGAAAGGTATGAAGTTGCTGGAAAATGGAGAGCAAGGATTACAATGGCTGGGTTCAATTCATCTCCAATGAGTAGTAATGTGAGTGATGAAATTAGAAAACTTATTAAGATGTACTGTGATAGGTACAACATAAAGGAGGAAAAGGGTGCACTTCATTTTGGTTGGGAAGATAAAAACTTGATTGTTGCTTCAGCTTGGAGGTGA 1632 0.394 MYRTDAYSSQSYKKYFHDLQTEELIEPSSSEISTTSIDQDGASSSYQLIASSGASLLTNKPFDTFLMSTRNHSADKSNFGSDSMENRSVDSIEIDSEMRSKLQALEKALLDDSEADEEEEYVTSQSMEIDSIQNMLINDHDSPKEYSSSDSNISTISITNTKEITRISRTPKQLLYECANAISEGNKEEATSMINSLRKMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYRALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDRKVHIIDFDINQGSQYINLIQTLASRPCKPSHVRLTGIDDPESVQRSIGGLNIIGQRLEKLAESLGLSFEFRAVASRTSIVTPSMLKLNCCPDEALVVNFAFQLHHMPDESVSTINERDQLLRLVKSMNPKIVTVIEQDVNTNTTPFLQRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNTVACEGEDRIERYEVAGKWRARITMAGFNSSPMSSNVSDEIRKLIKMYCDRYNIKEEKGALHFGWEDKNLIVASAWR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02229 543 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 542 IPR030011 GO:0003700|GO:0005634
Car05g02229 543 ProSiteProfiles GRAS family profile. 162 543 IPR005202 -
Car05g02229 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 542 IPR005202 -
Car05g02229 543 Pfam GRAS domain family 172 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02229 Car-Chr5 67507222 67510293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02229 5 543 GRAS Transcription Factor Family AT1G21450 61.243 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car05g02229 GRAS 5.5e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02229 - - cam:101513397 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02939 04 56588867 56590671 Car05g02229 05 67507222 67510293 PCT