Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02227 ATGTCTCAGGGAAGAGGCAGTGCATCTATAAACATAATCACTTTGATTTCACTGCTGTGCCTTTTGGTTCTTGCAGAACGAGCTAATGCAGCAACTTACACTGTTGGAGGACCTGGTGGGTGGACCTTCAACACTAATACTTGGCCTGATGGTAAAAAGTTTAAAGCTGGTGATGTGCTCATATTCAAGTATGATTCAACGACACACAATGTAGTTGCCGTGGACAAAAGTGGATACAGCGGTTGTAAGACGCCGGGAGGTGCTAAAGTGTTCAGTACAGGGAGTGACCAAATAAGGCTAGGAAGAGGTCTGAATTACTTCATATGCAACTTTCCTGGTCATTGTGAATCTGGGATGAAGGTTGCCATCAATGCAAGTTAA 381 0.4383 MSQGRGSASINIITLISLLCLLVLAERANAATYTVGGPGGWTFNTNTWPDGKKFKAGDVLIFKYDSTTHNVVAVDKSGYSGCKTPGGAKVFSTGSDQIRLGRGLNYFICNFPGHCESGMKVAINAS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02227 126 SUPERFAMILY Cupredoxins 31 125 IPR008972 -
Car05g02227 126 PANTHER BASIC BLUE-LIKE PROTEIN 8 124 - -
Car05g02227 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
Car05g02227 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Car05g02227 126 PANTHER BLUE COPPER PROTEIN 8 124 IPR039391 GO:0009055
Car05g02227 126 Pfam Plastocyanin-like domain 41 119 IPR003245 GO:0009055
Car05g02227 126 Gene3D - 31 125 IPR008972 -
Car05g02227 126 CDD Plantacyanin 31 125 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02227 Car-Chr5 67482441 67484133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02227 1 125 Phytocyanin Superfamily AT1G17800 38.235 5.58e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02227 - - gmx:100788635 218.779