Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02222 ATGACGAACAACGAGTTACAACGGTTTGCAGCCTCGTCTTCATCTCATTTTCGTAGCCATTTTTCAAAATCATTCTCCCTTCGGAAGAAAGTGCCATGGTGGTACCAAATACTCCATCCACGTTCACAATTCATTGCACGATGGAACATAATGTTCCTCTATTCCTGCCTCTTTGCTCTGTTTTTAGACCCTCTTTATTTCTACATTCCCATTACGGGTGACAAAGCTTGTATGCAAACTGATTTGGTTCTCGGTGTTTGCGTCACCTTTGCACGTACCGTCGCTGACCTATGCTTTTTCTTTCATATGATTCTTAAGTTTCGCACCGCTTTCAATTCTCCTACCTCTCACATTTATGGTCGCAAAGAACTTATAACGGATCCAAGTATGATCGCTCACCGATACCTCAAGCATGATTTCATCATTGATCTTCTTGCTACTCTTCCTTTGCCCCAGatagttatttggattgtgattccggcgacaaaaaattcaacagcagctcatgcaaaccacacactgtccctaatcgttctgattcagtacattcctaggttgtttcagatttttcctttacaacgccgaatcttgaagaccagcgggcttatagccaaaactgctttggcaggggcattgtacaatctcggtttctacatgctcgccagccatGTTTTAGGAGCAACATGGTATGTGACGTCTATTCAACGACAATACGAGTGTTGGAGAATAATGTGCAAGAAGGAAATGAACAGAACACATTCTCCTTCTTGTAATCCTTCTTTTTTTGATTGTACTACTCTTTATAACCGTGAGCGCCAAGCTTGGTTCAGACGCACTAAAGTCCTCACTGATTGTGATGCCCTCAATGATAAAAATCACTTTCAGTTTGGAATGTTTGCTGATGCTTTTACTGACCATGTCTCTTCCTCTAGATTCTTCCAAAAATATTTTTATTGCCTCTGGTGGGGCTTGAAAAATCTAAGTTCATACGGACAAAATCTTCAAACTAGTACTTACAGTGGTGAAACATTATTTTCAAGTTGCATATGCATATCAGGTCTTATCCTCTTTGCACATCTCATTGGTAATATGCAGAATTATCTGCAATCTTCAACTGCAAGACTTGAAGAGTGGAGACTGAAACAAAAAGATACAGAAGAATGGATGAATCATCGCCAACTTCCACCGGAACTACAAGAACGCGTTCGTCGCTTTGTTCAGTATAAATGGCTTGCCACTAGAGGTGTTGACGAAGAAGTCATTTTGCGCTCCTTGCCCGTTGATCTTCGCCGCCAGATTCAGAGGCATCTCTGTCTTGATATTGTCCGCCGGGTACCATTTTTTGGCCAAATGGATGATCAACTTCTAGATGCTATATGTGAACGTCTAGTTTCATCTTTGAACACAAAAGATTCATATATAGTTAGAGAAGGTGATCCAGTGAGGGAGATGCTTTTTCTCATCAGAGGAAGTGTAGAGAGTTCTACAACAGATGGTGGTAGATCAGGTTTCTTCAATTCTATCACACTAAAACCAGGTGACTTTTGTGGTGAAGAACTGCTAACATGGGCTTTGATGCCAACATCAAATCTCAACCTTCCATCTTCTACAAGAACAGTGAAGACCCTAAGTGAACTAGAAGCCTTTGCACTTAGAGCAGAGGATCTCAAATTTGTGTCAAGCCAGTTTAAGAAACTTCACAGCAAGAAACTCCAACATGCTTTCAGATACTATTCTCATCAGTGGAGAGCTTGGGGGGCTTCTTTTATACAAGCGGCTTGGCGGCGTCACCGCAAGAGAAAATTGGCAATGGAGTTGATGGAAAAAGAGAACTTGTTATATGGAAATATGGAGTTGGAAGATTATGAAGAGGAGAGTGATGCAGGGGAGAGTTCCATGGGAGATAATGCCAGTCATGGACAAAATTTTGGGGTTACATTTTTGGCGTCAAAGTTTGCTGCAAACACTAAGAAAGGAGCATTTAAAAAGGTGACATTAATCCCTGATAGTAGTAGTTTAAAGATGCCTAAGATGTTCAAGCCAACTGAGCCTGATTTCTCAACATTTCAAGAAGATTAA 2079 0.3665 MTNNELQRFAASSSSHFRSHFSKSFSLRKKVPWWYQILHPRSQFIARWNIMFLYSCLFALFLDPLYFYIPITGDKACMQTDLVLGVCVTFARTVADLCFFFHMILKFRTAFNSPTSHIYGRKELITDPSMIAHRYLKHDFIIDLLATLPLPQIVIWIVIPATKNSTAAHANHTLSLIVLIQYIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGATWYVTSIQRQYECWRIMCKKEMNRTHSPSCNPSFFDCTTLYNRERQAWFRRTKVLTDCDALNDKNHFQFGMFADAFTDHVSSSRFFQKYFYCLWWGLKNLSSYGQNLQTSTYSGETLFSSCICISGLILFAHLIGNMQNYLQSSTARLEEWRLKQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEVILRSLPVDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDSYIVREGDPVREMLFLIRGSVESSTTDGGRSGFFNSITLKPGDFCGEELLTWALMPTSNLNLPSSTRTVKTLSELEAFALRAEDLKFVSSQFKKLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKRKLAMELMEKENLLYGNMELEDYEEESDAGESSMGDNASHGQNFGVTFLASKFAANTKKGAFKKVTLIPDSSSLKMPKMFKPTEPDFSTFQED 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02222 692 Gene3D Jelly Rolls 445 565 IPR014710 -
Car05g02222 692 ProSiteProfiles cAMP/cGMP binding motif profile. 447 521 IPR000595 -
Car05g02222 692 SUPERFAMILY Voltage-gated potassium channels 40 369 - -
Car05g02222 692 Gene3D - 75 371 - -
Car05g02222 692 Pfam Ion transport protein 48 374 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car05g02222 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 689 - -
Car05g02222 692 Pfam Cyclic nucleotide-binding domain 470 557 IPR000595 -
Car05g02222 692 CDD CAP_ED 447 578 IPR000595 -
Car05g02222 692 SMART cnmp_10 447 575 IPR000595 -
Car05g02222 692 MobiDBLite consensus disorder prediction 672 692 - -
Car05g02222 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 8 689 - -
Car05g02222 692 SUPERFAMILY cAMP-binding domain-like 376 572 IPR018490 -
Car05g02222 692 Gene3D Helix hairpin bin 373 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02222 Car-Chr5 67427694 67431439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02222 18 686 Ion Channels AT3G48010 65.882 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02222 K05391 - gmx:100783672 1190.64