Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02213 ATGAACAATTCAATTGGATTCATCTTGTTTCTGGTTTTTTGTGTTAATGTTACAGTTTTAGTTCAAGCACAACAACAAACAGGCTTCATAAGCATTGATTGTGGTGGTCCAGAGAATCTTGAGTACACTGATGATACAAAAATAAAATACAGCACAGATGGATCTCACATACAAACAGGACTTAACATGAACATTTCTTCTGAGTATGCATATCCAAAGAATCCAAATCTACCATTACCACTCTCAGATCTCAGAAGTTTTCCTCAAGGAAAGAGGAACTGTTACCGATTAATTGCCGGAAGAAGAGGCAGTTTACATTTAATAAGAGCTTCTTTCTTGTATGGAAACTATGATGGAGAAAACAAACTACCTGAATTTGATCTCTATATTGATGTCAATTTTTGGTCATCGGTGAAATTCAGAAATGCTTCAGAAGAAGTTACATTGGAAATAATAAGTGTGGCGAAATCGGAGGAAACAAATGTTTGTCTTGTGAATAAAGGAGATGGAATTCCTTTTATATCAGCATTGGAACTTAGACCAATTAATAATTCAATTTATAACACTGAGTTTGGTGAATCTGCTTCACTTTTACTTTACAAAAGATTTGACATTGGATTAATCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCATTTAGTTCCTCTTCGTGGaaatctttaaacacttcttcagaaattgatgttaatggagatggatttaaaGTACCATTTGAAGTTATTAGAACTGCTGCTACGCCAAGGAATGAAAATGATAGTTTGGAATTTTCTTGGATTCCAAGTAATCCAAATTTGAAATTTTATGTCTTTTTGTATTTTGCTGAATTGGTGAAACTTAAGAAAACTCAGCTGAGAAAATTCAATATTTCTTGGAATGGTTCTCCTTTGACTAAATCATTAGTACCAAGCTACTTGTACGCAACCACTGTTTTTAATTTGAAGTCGTTGGTGGCGAACGAGCATCGAATTTCAATACAGAAAACCGAAGATTCGACACTTCCACCTATTCTTAATGCAGTGGAGATTTATGTACTAAGACAAGTTGAAGCACTTCCAACATTTGAAGAAGATGTTGAAGCTATAAGGAGCGTAAAAGAAAGTTATAGAGTTCAAAGAAATTGGGTAGGTGATCCATGTGAACCAAAGAACTACACTTGGGAGGGCTTAAAATGCAACTACAGCACTTCACTTCCTCCAAGAATTGTATCACTGAATCTAAGCAGAAGCAGTCTGAGTGGGACAATAGCTCCTGCCATTTCCAACCTGTCTTTCTTGGAATCTTTGGATTTATGTAACAATAGCTTAACTGGATCAATGCCTCAGTTTTTGGAAGAATTGAGTTCCCTTAAATATTTGAATTTAAGAGGCAACCAACTTTCAGGTTATGTCTCTACCACTCTCTTACAAAGATCAAAGACTGGATTACTTACTTTGAGGGTGGATGATAAAAATCTCTCTGATTCAGATTCAAGTAACAAAAAGAAGGAAATTGTTTCCATTGTGGCATCACTATCATCAGTTTTAGTTCTATTGGTCTTTGCCATTCTCTATTGGAAGCATAGAAGAAATGAACAATCAGAGGAGGAGATGAACATGGTGTATAAAGGAGTAAAAACTGTAGAATCAAAGAAGTGGCAATATACTTATACTGAGGTGTTGGAAATCACCAACAACTTTGAAATGATCATTGGGAAGGGAGGATTTGGAACTGTTTACTGTGGTCAGATGAAAGATGGCAATAAAGTTGCAGTCAAGATGCTTTCTCCATCTTCAGCTCAGGGGCCAAAGGAATTTCAAACTGAAGCTGAACTTTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGTGACAAGATGGCACTCATATACGAGTACATGGCCAGTGGCAACCTGAAAGATTACCTCTCAGATAAAAATTCACATTGTTTGAGTTGGGAAAGGAGACTTCAAATAGCAATTGATGCTGCAGAGGGATTGGACTACCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAGTCAGCTAACATTCTTCTAAGTGAAGACTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAACAGAAATGCAGAATCTGCAATGATTCATGTTGATGATAGAAATGAAACATCTACAATCATGGGAACAATGGGTTATCTTGATCCAGAGTACTACAAATTAAGAAACTTGAATGAAAAAAGTGACATATATAGCTATGGAGTAGTACTATTGGAATTAATCACAGGTCTCCCTGCAGTAATGAAAGGAAAGCCATCAATACACATACTTGAGTTTGTAATACCACAACTTGAAAAGGGTGAAATAAGTAGAATCATAGATCCAAGACTCCAAGGAAAATTTGATATAAATTCAGGATGGAAAGCATTAGGATTAGCAATTGCATGCACTGCATCAACCTCAATTCAGAGACCAACAATGAGTGCTGTGTTATCAGAGCTGAAACAATGTGTTAAATTGGAGTCACATAATGATAGTGAAATATTTGTGGCACCACGACATATCTATAGTGAACTTTATAGTTCATCTGAAGCATTTAAATCTATAGATAGTGAATCTATGACATATTCGTTCCCAAGGTGA 2691 0.3519 MNNSIGFILFLVFCVNVTVLVQAQQQTGFISIDCGGPENLEYTDDTKIKYSTDGSHIQTGLNMNISSEYAYPKNPNLPLPLSDLRSFPQGKRNCYRLIAGRRGSLHLIRASFLYGNYDGENKLPEFDLYIDVNFWSSVKFRNASEEVTLEIISVAKSEETNVCLVNKGDGIPFISALELRPINNSIYNTEFGESASLLLYKRFDIGLINGSGRYEDDVYDRIWFPFSSSSWKSLNTSSEIDVNGDGFKVPFEVIRTAATPRNENDSLEFSWIPSNPNLKFYVFLYFAELVKLKKTQLRKFNISWNGSPLTKSLVPSYLYATTVFNLKSLVANEHRISIQKTEDSTLPPILNAVEIYVLRQVEALPTFEEDVEAIRSVKESYRVQRNWVGDPCEPKNYTWEGLKCNYSTSLPPRIVSLNLSRSSLSGTIAPAISNLSFLESLDLCNNSLTGSMPQFLEELSSLKYLNLRGNQLSGYVSTTLLQRSKTGLLTLRVDDKNLSDSDSSNKKKEIVSIVASLSSVLVLLVFAILYWKHRRNEQSEEEMNMVYKGVKTVESKKWQYTYTEVLEITNNFEMIIGKGGFGTVYCGQMKDGNKVAVKMLSPSSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYMASGNLKDYLSDKNSHCLSWERRLQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNRNAESAMIHVDDRNETSTIMGTMGYLDPEYYKLRNLNEKSDIYSYGVVLLELITGLPAVMKGKPSIHILEFVIPQLEKGEISRIIDPRLQGKFDINSGWKALGLAIACTASTSIQRPTMSAVLSELKQCVKLESHNDSEIFVAPRHIYSELYSSSEAFKSIDSESMTYSFPR 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02213 896 Pfam Malectin-like domain 32 356 IPR024788 -
Car05g02213 896 Pfam Protein tyrosine and serine/threonine kinase 573 849 IPR001245 GO:0004672|GO:0006468
Car05g02213 896 SMART serkin_6 570 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02213 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Car05g02213 896 PANTHER OS07G0107800 PROTEIN-RELATED 5 860 - -
Car05g02213 896 CDD STKc_IRAK 576 852 - -
Car05g02213 896 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515
Car05g02213 896 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Car05g02213 896 PANTHER BNAC07G41790D PROTEIN 5 860 - -
Car05g02213 896 Gene3D Ribonuclease Inhibitor 360 488 IPR032675 -
Car05g02213 896 SUPERFAMILY L domain-like 396 516 - -
Car05g02213 896 SUPERFAMILY Protein kinase-like (PK-like) 555 850 IPR011009 -
Car05g02213 896 Gene3D Phosphorylase Kinase; domain 1 551 645 - -
Car05g02213 896 Gene3D Transferase(Phosphotransferase) domain 1 646 870 - -
Car05g02213 896 ProSiteProfiles Protein kinase domain profile. 570 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02213 Car-Chr5 67367689 67374233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02213 3 881 Receptor kinase-like Gene Family AT4G29180 50.112 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car05g02213 Malectin_like 8.5e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02213 - - gmx:100793137 1317.37