Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02192 ATGGGCTCGTGTGGTGAACCGGTAATCGTTGGTGATCCGGCACAATTGGAGCAGCCTTTGTGCTCGGGTTTTCCGGCACAGTTAGTTTCTGTGCAGGAGTCATGTTCAGAAGAACCTTGCGATGTTTTAGACGTATCTGGTATGGCGGATGGTTTTTTGGGAGAGGGTGAAGTGGGTTGTTCTGCAAGCTATCTTGATGTTATGGAGGGGTACGGAGATGCTTTGACAAATGAATGTGAAAATGATGATATGTCACAATTGGAGAAAACTGCTGAAGATGGTTGTTGGAATAGTTTGGGGATTTGTTCTGAGGACATTGAAGTTTCCGGTCTTAAAAGTGGTGGATTGTGCTTAGAAGGAAATTTTAAAGATGAAGGAAACCTTGACCTGCCGTTGGAGTCCATAACCTCAAATGATTTGCAGAAGCATTGGGCTGAACAGGGTGAGCAGAAGAATGGCAAGAACATTATGGTATTCTCGGTAGGAGATGATTTGACAGTCGTGGAAGGCAAAAACGATGGTGCTGATTTACTAGCTGGTGCTGTCAACTGTGTGCTTGATGTTGAGCATTCTGAAGTGCCTTTGGAATCAGATAGCTGGCCAAAGGCTGTGGAAAATTGTGATGCTTTAGATGGGATAGAAGCGAATTCTTGCAGGCAGATATCTTCTTCACTAAATTTTGAAGTGCCGTCAGGTGTCTTGTTTATAGATGCAAAAGTAGAGAGCACAAGTGATAAGCTACACGATCTAAAAAATGGCGAGGATTGTGACAGTACTTGTGATGAAAAGATAAGAGCCTTTGTTGATAAAGAAATCACTGTTAATTCATATGTACAAGCGTCGTCCTCACCAGATACAAAAGAAGAGAGCACAAGTGATGAGCTACATGACCAGAAAAATGGTCAGGATTATAAAAGTAGTTGTGAAGAAAAGTTAAGAGCCTTTGTTGATAAAGAATCAACTGTTAATTCGTATTTACAAGCATCGTCCTTGCCAGATTTCCATAGGACCCTGAGGACTTCACCTGTAATTGATTCACAATGTCAGCCTACCTTGATGGATCCAGGGGGTGAATTGAAGAATGGCATACTGCAAACAGAAGATAATTTCTGTACATTGAAGGATTGTTCTGCAGATGGAAATGCCAACTCTACCATTAGAAAACAATTTTATCCAGAATCAGGTCAGTCCTCTTTTGTTGTTCTCACCAATAGCTTTCCAAAGGATGCGCCGGATCTCCTTTCCAAGGGCGATGGTGCTTCCATCAACAATGATTGTGCTGTAGACAATCCTGGACAAACAAATAATGATGGAAAAGAAGATGTTGAAGTTGATCATATTACTGAAAACATACTGTTACCTTCTCAAAGGAGTCAAAGAACCAAATTTGGTAGTAAGACACAAACCAGGAAGGCTTCTAGAAAATCCAAGAACAAAGCCAGTATGACACATCGAGGTGGAGGTATGAATATGAACTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTATGCAAACCGGCTCGTTCTTCTGTCTGGGGATCGCTTGGGAATATTGAACAGTTTTTTCAGCACGAAAACGAGCTGGAGGTTAGTGAAGCCATGTGCCAGAATGTGGTGAAAGCTAGAAGCAAGTTTCAAGGTGGGGAAATGATTAAGAATGCTACAAGTTCTAGCTCATTAAGTTCAGTTCAAAAGGATAATGTTCCAACTTCAACTACTCGTTTTCGTCTGAAGATCAAGTTTGGAAAAGAAAATGCTTTACGTTGCTCAAACGTCTTGATTCCGGAGTCTGTTGGTGGCTTGGCTTCTGCTTCCTACTTGGAGTCGGACCCAGGTTCTCGGAAAGTAGCCAGCAATTCTGCAGATAAATTTTCTGAAGCATTGGCTTTAAGCAATTTAGAATCATTCAGAAATGACCTGGACAAGGATTTTGTTGTTCTAAATGGACAAATTGTAAATAGCCAGTTAGAAAATTCTAAAATAACGGAGAAGTCAGATGAGGATGCAGTGGAACCATGTCATGCAGGTCCTCCAGAGAAAGTGGTTGAAGCATTAGTTAAGCCAATTAATAATTCAGTTATAGATCCCGGAACGTCACCTGATTCAGAAGTCATTGATTCAATTCCTGACGTCCAGGTTGGAGAAAGACATGAAGATGTACATTTTTCTGTGTTAGGTTCTTCTAAGGAGTTAAATTCTCATATGGACGTTACCTTCAGGAATAGAGGGAAGAAGAAAGACAAGCTTATTTATTCAGGCAATTGCATCACTGAAGATGGATCACAAGGTCAACCAGGGAATAATAGAGCTAAGCATTCGAAGAATCACAGACGTAAGAGAACCTCCAGTGATGTGGTTAGCTCTTTAGAATTGCCTATTTCCACTGAGCTAAGCAAATCTGTAAAGAGTAAAGAATTGTCTGCAGAATCATCGCCCCTTTCTGGAGATATTGTACTTGGAGGCCCTATGGAGTCTTTGAAAGTTAAAAGTCATGCGATAGTCAAGACAGCTGGCAAATCATCTGCTGACCATGGTTTTACTGAACTCCAGGGTTCAAAAAATTTACCGTCTTCTACAAGACCTTGGGGTCGTAAACTACCTAAAAGTCTTGAACCTAGAAAAGTTAGCAAGGGTAAATCCAAAGCTTCTGACTCGACAAGCAGGAAAAAGCCTACTTCTAGGCCCAAGGAGAGACAGAAAGAGCCAATTAACAGAAGTGAAGTAAAGGGAAAAGATGTCTCTCTCAAAGTTACATGTGAAGTGGAAGATCACCCACATCCAGCAGATATAGTTGGAAATCATAAGTTGGCTGGTGTTGGAAAAATTAATACCGGTGACAACAGAGTACCAGTCAGTGTGTCTAATTTGGACGTGATGCCTGGTTTTGGTTTGGAAGAACAGCAGCAGTCACCTCGTAATGCATGGGTGAGTTGTGATGACTGTCACAAGTGGCGGCGCATTCCAGCTTTGCTTGCAGACCAGATTGATGAAACTAACTGCACCTGGACTTGCAAGGACAGCAGTGATAAAGCCTATGCTGATTGTGCTATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTAGGATTATCAGACGCCTCTGGTGAAGAAGATGCATATGGAAACTCCAAAACTCATAAGGAGTTGGAATATCAACTGCCTTTGGTTTCCCAAGAGTCAACTTTTACCCGCATTTTCACAAATGAATTTCTGCATCGTAACCCAAGAACTCAGACTATTGATGAGGTAATGGTTTGCCATTGCAAGCCACCTCGAGAAGGCAAGATGGGATGTGGGGATGAATGTCTAAACCGGATGCTTAACATCGAATGTGTGCAAGGAACTTGCCCATGTGGGGACCGTTGTTCCAATCAGCAGTTCCAAAAACGCAATTATTCCAGACTGAAGTGGTTTAAATGCGGGAAAAAAGGTTATGGACTGAAGGCACTTGAGCGTGTAGCTGAAGGCCAGTTTATTATTGAATACGTTGGAGAGGTGCTTGACGTGCATGCATACGAGGCACGCCAGAGAGAGTATGCTTTGAAGGGTCATAGACATTTCTATTTTATGACCTTGAACGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAATTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGAGAAATCTGTATTGGACTGTTTGCATTGAGGAATATCAAGCAGGATGAAGAATTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAGTGTTATTGTGGTTCACTTCACTGTCAAGGATATATAGGCGGTGCGGATCCAAATAACGGTGAGCTTATAGTTCAAGGTGAATCAGATGATGAATTTCCAGAACCTATGATGCTTTCTGAAAATGGTGAAATTGACGACAGCGTACTCATGCCCAAATGCATTGATAGTGTTAATACAAAGTCTTCTAGGCATTTAATAACAGACAGGGATGTATTGGACAAGTGTACAACTGCTATATGTGCAGATGGTTCTCCAGAGGAAGACAGTTCTACAAACCCTGCCTCTGCTGTTTCCCTGTTGCACAGTTCAGTTGAAGTGGAAGACTCAAAAAGCAATTTACCATCTTCTGATCGAATAGAAGAAATTTCTCAACAAATAGAGGATACAACAAGCAAACCCATGCCTGCTGACAGCAAAGAATTGCCGAATTCTACTGATAGTAATAGAGAATCCAAATCTGAAATGGTTGAAGTCGGGAATGATTTTTCACAATCACATCTGCTTGTGAAGACTCCTCGACTAAATGCTTCTGTTAAAAAGGGTAAGGTAAGGGCTAATGCTGCAAATGCCCTTACAGCCGAGGTGGCGGCCCCTCGATTGCCAGTATCATCTATCAAAAACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGGGAAACTTAATGAGTTGCTGGATGGAAATGGAGGAATAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAACTTTTGCTTCTCACCGTGGCATCAGGCGATAGAAGCAATGGTGAAGCAATTCAGAGTAACCGAGATCTTTCCATGATCCTTGATGCTCTTCTGAAAACAAAATCGAGAGCCGTGCTAAATGATATTATTAGTAAAAATGGTTTACAGATGTTACATAAGATCATGAAGCAGTATAGGCAAGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTAGAGTACCTGGCAGCAGGCAAGATTTTGACTCCTGAACATATCAATGGTGGTCCTCCTTGTCATGGAATGGAGAGGTTTAGGGATTCAATGCTGTCTCTGACAGAGCATGATGATAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCAAGACATGGCAGAAAACATGGCTATATGGACAGGGATGATAACAGGATGGAATCTCACAGAGGTTTCAACTCCAACAGATTTTCAGTATCACACAGTCATAGGCACGAGCAGGGATTAAGACCTAAGGAAGCAACTGATTGTGGTCAGCAGCCAATGCTTGTGGCAACAGTAGACGCGCGTGCCCAGGAGGGCTGCTCTACACCATCTTTGGATGGAGTTGAGATCAACGGGGCAAAAAAACGTAAGCGCAAAAGCCGATGGGATCAACCAGCAGAAACAAATTCATATTCTGATGCTATCATTAGTTCTATTAATGAAAGCCAGAACGTTCATGAAGAAGTTCCACCCGGATTCTCATGTCCAATACGTTCATTAAACAGTGCACTAAACTCTGGTACTCCTGCTTTGCAAAATGCAAGCCATTCTGGATGCCCCCCAAGTTTAGTTATTGGTCAGCCAAAAGAGAAATTCAATTCTCGTTTGCCTGTCTCATATGGATTGCCATGGTCTGTTGCGCAACAATATGGAACTCCTCATGCTGAAATCACAGGGTGTTGGATCACTGCTCCTGGCATGCCTTTCAACCCGTTTCCTCCATTACCCCCATATCCACGGGATAACAAAGACTGTCAACCTTCCAGTATGGAAATTGATCAGCCTGCTGAAGTTAAGCAATCGGACGCCACTGGTCCGGTTAATTGCTGCTCAGATGATATGATTCCCAGCACAACTGGTGCTAACTCTGAAGACACGAACCTTCAATGTGAGGATGCTAAACATGACGCTAAGCGATTGAAGGGTGATGATTCTGATGATTTGGGAAAGAAGTACTTTAGACAGCAGAAATGGAATAATTCAAAAATACATCGAACATGGTTCAAAAGGGATGCATGGAAATGTAATGGGAACAGCTCTAGTGGTGATATTTGCAGTATAGATGTAGGAGATGTGTCAAAAGAATCAAAAGTTACTAGTTATTCAGAGGAGGATGAAATCTGTAGAGAGGAGAAAGGTGGAAAATAA 5940 0.4194 MGSCGEPVIVGDPAQLEQPLCSGFPAQLVSVQESCSEEPCDVLDVSGMADGFLGEGEVGCSASYLDVMEGYGDALTNECENDDMSQLEKTAEDGCWNSLGICSEDIEVSGLKSGGLCLEGNFKDEGNLDLPLESITSNDLQKHWAEQGEQKNGKNIMVFSVGDDLTVVEGKNDGADLLAGAVNCVLDVEHSEVPLESDSWPKAVENCDALDGIEANSCRQISSSLNFEVPSGVLFIDAKVESTSDKLHDLKNGEDCDSTCDEKIRAFVDKEITVNSYVQASSSPDTKEESTSDELHDQKNGQDYKSSCEEKLRAFVDKESTVNSYLQASSLPDFHRTLRTSPVIDSQCQPTLMDPGGELKNGILQTEDNFCTLKDCSADGNANSTIRKQFYPESGQSSFVVLTNSFPKDAPDLLSKGDGASINNDCAVDNPGQTNNDGKEDVEVDHITENILLPSQRSQRTKFGSKTQTRKASRKSKNKASMTHRGGGMNMNLEAARKKRSCLCKPARSSVWGSLGNIEQFFQHENELEVSEAMCQNVVKARSKFQGGEMIKNATSSSSLSSVQKDNVPTSTTRFRLKIKFGKENALRCSNVLIPESVGGLASASYLESDPGSRKVASNSADKFSEALALSNLESFRNDLDKDFVVLNGQIVNSQLENSKITEKSDEDAVEPCHAGPPEKVVEALVKPINNSVIDPGTSPDSEVIDSIPDVQVGERHEDVHFSVLGSSKELNSHMDVTFRNRGKKKDKLIYSGNCITEDGSQGQPGNNRAKHSKNHRRKRTSSDVVSSLELPISTELSKSVKSKELSAESSPLSGDIVLGGPMESLKVKSHAIVKTAGKSSADHGFTELQGSKNLPSSTRPWGRKLPKSLEPRKVSKGKSKASDSTSRKKPTSRPKERQKEPINRSEVKGKDVSLKVTCEVEDHPHPADIVGNHKLAGVGKINTGDNRVPVSVSNLDVMPGFGLEEQQQSPRNAWVSCDDCHKWRRIPALLADQIDETNCTWTCKDSSDKAYADCAIPQEKSNAEINAELGLSDASGEEDAYGNSKTHKELEYQLPLVSQESTFTRIFTNEFLHRNPRTQTIDEVMVCHCKPPREGKMGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRNYSRLKWFKCGKKGYGLKALERVAEGQFIIEYVGEVLDVHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRNIKQDEELTFDYNYVRVFGAAAKKCYCGSLHCQGYIGGADPNNGELIVQGESDDEFPEPMMLSENGEIDDSVLMPKCIDSVNTKSSRHLITDRDVLDKCTTAICADGSPEEDSSTNPASAVSLLHSSVEVEDSKSNLPSSDRIEEISQQIEDTTSKPMPADSKELPNSTDSNRESKSEMVEVGNDFSQSHLLVKTPRLNASVKKGKVRANAANALTAEVAAPRLPVSSIKNKKVEGSSNGRFEAVQGKLNELLDGNGGISKRKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIISKNGLQMLHKIMKQYRQDFKKIPILRKLLKVLEYLAAGKILTPEHINGGPPCHGMERFRDSMLSLTEHDDKQVHQIARSFRDRWIPRHGRKHGYMDRDDNRMESHRGFNSNRFSVSHSHRHEQGLRPKEATDCGQQPMLVATVDARAQEGCSTPSLDGVEINGAKKRKRKSRWDQPAETNSYSDAIISSINESQNVHEEVPPGFSCPIRSLNSALNSGTPALQNASHSGCPPSLVIGQPKEKFNSRLPVSYGLPWSVAQQYGTPHAEITGCWITAPGMPFNPFPPLPPYPRDNKDCQPSSMEIDQPAEVKQSDATGPVNCCSDDMIPSTTGANSEDTNLQCEDAKHDAKRLKGDDSDDLGKKYFRQQKWNNSKIHRTWFKRDAWKCNGNSSSGDICSIDVGDVSKESKVTSYSEEDEICREEKGGK 1979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02192 1979 Pfam CW-type Zinc Finger 975 1021 IPR011124 GO:0008270
Car05g02192 1979 PANTHER SET DOMAIN PROTEINS 455 1905 - -
Car05g02192 1979 CDD SET_SETD2 1134 1276 IPR044437 GO:0010452|GO:0046975
Car05g02192 1979 Gene3D - 964 1028 - -
Car05g02192 1979 MobiDBLite consensus disorder prediction 278 304 - -
Car05g02192 1979 Pfam SET domain 1146 1252 IPR001214 GO:0005515
Car05g02192 1979 MobiDBLite consensus disorder prediction 843 859 - -
Car05g02192 1979 MobiDBLite consensus disorder prediction 755 789 - -
Car05g02192 1979 ProSiteProfiles Post-SET domain profile. 1260 1276 IPR003616 -
Car05g02192 1979 MobiDBLite consensus disorder prediction 755 769 - -
Car05g02192 1979 ProSiteProfiles Zinc finger CW-type profile. 969 1023 IPR011124 GO:0008270
Car05g02192 1979 SMART shorttest3 1083 1134 IPR006560 GO:0005634|GO:0018024
Car05g02192 1979 MobiDBLite consensus disorder prediction 838 911 - -
Car05g02192 1979 SMART set_7 1135 1258 IPR001214 GO:0005515
Car05g02192 1979 Gene3D SET domain 1032 1287 IPR046341 -
Car05g02192 1979 SUPERFAMILY SET domain 1064 1266 IPR046341 -
Car05g02192 1979 MobiDBLite consensus disorder prediction 467 481 - -
Car05g02192 1979 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 455 1905 - -
Car05g02192 1979 MobiDBLite consensus disorder prediction 287 304 - -
Car05g02192 1979 Pfam AWS domain 1098 1132 IPR006560 GO:0005634|GO:0018024
Car05g02192 1979 MobiDBLite consensus disorder prediction 1387 1417 - -
Car05g02192 1979 MobiDBLite consensus disorder prediction 866 911 - -
Car05g02192 1979 ProSiteProfiles SET domain profile. 1135 1252 IPR001214 GO:0005515
Car05g02192 1979 MobiDBLite consensus disorder prediction 1707 1733 - -
Car05g02192 1979 MobiDBLite consensus disorder prediction 1389 1405 - -
Car05g02192 1979 ProSiteProfiles AWS domain profile. 1083 1133 IPR006560 GO:0005634|GO:0018024
Car05g02192 1979 MobiDBLite consensus disorder prediction 454 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02192 Car-Chr5 67165382 67178952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02192 1117 1276 Su(var)3-9 homologs AT1G73100 34.021 7.36e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car05g02192 SET 9.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02192 - - mtr:MTR_3g088625 2829.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02192 05 67165382 67178952 Car05g02192 05 67165382 67178952 ECH