Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02191 ATGGTTGAATTTATTGATGGGCTGAACAAGTATGGAAAGGGTGACTGGAAAAGTATATCAAGGCACATGAGAACAAGAACACCTACACAAGTAGCAAGTCATGCTCAGAAATACTTCAATCATTTGAAGTCAATCAATGAGAATAAAAAAAGAAGGCGGCGACCGAGCATACACGACGTCACTCATCTGGAAAATGGAAATACTTCAGCACACCAACTGCCAGTTATTGGCCAAACAAGCAATCCAACCCCTGGAGACATGGATTATGGTTTTGGGTCTGTTCATGAGACTGTTATTCCAGAGGCACTAATGAATTTGGGTCCTATGTCATATCCCATGCAGCATTCATATACTCTATGA 360 0.4111 MVEFIDGLNKYGKGDWKSISRHMRTRTPTQVASHAQKYFNHLKSINENKKRRRRPSIHDVTHLENGNTSAHQLPVIGQTSNPTPGDMDYGFGSVHETVIPEALMNLGPMSYPMQHSYTL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02191 119 CDD SANT 3 39 IPR001005 -
Car05g02191 119 ProSiteProfiles SANT domain profile. 1 46 IPR017884 -
Car05g02191 119 PANTHER TRANSCRIPTION FACTOR SRM1 4 82 - -
Car05g02191 119 Gene3D - 2 46 - -
Car05g02191 119 PANTHER TRANSCRIPTION FACTOR KUA1 4 82 - -
Car05g02191 119 SUPERFAMILY Homeodomain-like 4 44 IPR009057 -
Car05g02191 119 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 43 IPR017930 -
Car05g02191 119 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 4 41 IPR006447 GO:0003677
Car05g02191 119 Pfam Myb-like DNA-binding domain 4 39 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02191 Car-Chr5 67156883 67157242 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g02191 Myb_DNA-binding 1.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02191 - - cam:101503083 252.292