Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02177 ATGTCGAATAACAAtcgtcgttcgtcgttttcttcgtcaacgacgtcgtcTATGGCTAAACGACATCCTCCAGTATCCGTTTTATCTTCGGATAACAACAACGCCGGAAAGGTTATCGCCTCCGCCAAGAAGCGTCCTCCTCTCACTAACCTCACCAATCAAAACGCTTCTCGCAACTCTTCCAATTTGGTAACGAAAGTTGCAAAGACGAAGAAAGAGACATCGCAATGCAATTCTTCTTCAAGTTCAGCAATTTCCGGCAACAAAAAACCTACTTTTTCAAATGTTAAATCCGCTTCTGTTGTTTTTCCTAAAGCCACAATTACCACTACTAGTACTACTTCATCATTCAGTGAAAGGAATGAAGTTGTTCCGTTGGTTGCAAACTTCAATGTTCCGGTTTCGAGTAGCATGGATTTATCTTTATCACCTGGTAAATCAGATGGAATGTCGGTCTCTATGGACGAAACGATGTCGTCTTGTGATTCTTTCAAGAGTCCTGATATTGAATACGTGGATAACACTGATATTCCAGCTGTTGATTCTATTGAGAGGAAAACTTTCTGTAGTCTTAACATTTCTGATAATAAATATCAATCAGGAAATATATGTAGTAGAGACATTCTTGTTGAGTTGGAAAAGGGGGAGAAAATTGTTAATATTGATAACGATCACGTGGATCCTCAGCTCTGTGCTTCCTTTGCTTGTGATATCTACAAGCATCTGCGTGCATCTGAGGCAAAGAAAAGACCTACCACGGATTTCATGGAGAAAATCCAGAAGGACATTAATCCCAGCATGCGTGCTATTTTGATTGACTGGCTAGTGGAGGTGGCTGAAGAGTATAGACTTGTACCTGATACATTGTATTTGACAGTAAACTACATTGATCGGTATCTTTCTGGGAATGCCATGAATAGGCAAAAATTACAATTACTTGGAGTTGCTTCTATGATGATTGCCTCCAAATATGAGGAGATTTGTGCACCCCAGGTGGAGGAATTTTGTTACATAACTGATAACACATACTTCAAGGAAGAGGTTTTGCAGATGGAATCTACTGTCTTGAATTTTCTGAAGTTTGAAATGACTGCACCAACAGTTAAATGCTTCTTGAGAAGATTCGTACGTGCAGCTCAAGGAGTTGATGAGGTCCCTTCACTGCAACTAGAGTGCTTGGCAAACTATCTTGCCGAATTATCTCTCTTGGAATACAGTATGCTTTGTTATGCTCCATCACTTATAGCAGCTTCATCAATTTTCCTGGCCAAATTTATGCTTTTTCCATCAACGAAACCATGGAATGCGACATTGCAGCATTACACTCTCTACCAGCCTGCTGATTTGTGTGCTTGTGTAAAGGATCTCCATCGTCTTTGTTGCAACAGCCCTACTTCTAATTTGCCTGCAATTAAGGAGAAATACAGTCAGCACAAGTTGGAAAGCGCTAGATTGACACAAAATCTCCATAGAGAAGGGCTTCTTGTATCTGCTTAA 1497 0.3914 MSNNNRRSSFSSSTTSSMAKRHPPVSVLSSDNNNAGKVIASAKKRPPLTNLTNQNASRNSSNLVTKVAKTKKETSQCNSSSSSAISGNKKPTFSNVKSASVVFPKATITTTSTTSSFSERNEVVPLVANFNVPVSSSMDLSLSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNTDIPAVDSIERKTFCSLNISDNKYQSGNICSRDILVELEKGEKIVNIDNDHVDPQLCASFACDIYKHLRASEAKKRPTTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESTVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQLECLANYLAELSLLEYSMLCYAPSLIAASSIFLAKFMLFPSTKPWNATLQHYTLYQPADLCACVKDLHRLCCNSPTSNLPAIKEKYSQHKLESARLTQNLHREGLLVSA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02177 498 SMART Cyclin_C_2 366 488 IPR004367 -
Car05g02177 498 MobiDBLite consensus disorder prediction 46 90 - -
Car05g02177 498 PANTHER CYCLIN-A1-1 33 481 - -
Car05g02177 498 MobiDBLite consensus disorder prediction 1 37 - -
Car05g02177 498 Pfam Cyclin, C-terminal domain 366 483 IPR004367 -
Car05g02177 498 PANTHER CYCLINS 33 481 IPR039361 -
Car05g02177 498 CDD CYCLIN 267 356 IPR013763 -
Car05g02177 498 Pfam Cyclin, N-terminal domain 237 363 IPR006671 -
Car05g02177 498 Gene3D - 237 482 - -
Car05g02177 498 SMART cyclin_7 370 458 IPR013763 -
Car05g02177 498 SMART cyclin_7 273 357 IPR013763 -
Car05g02177 498 PIRSF Cyclin_A_B_D_E 11 493 IPR039361 -
Car05g02177 498 Gene3D - 251 364 - -
Car05g02177 498 MobiDBLite consensus disorder prediction 1 90 - -
Car05g02177 498 ProSitePatterns Cyclins signature. 268 299 IPR006671 -
Car05g02177 498 CDD CYCLIN 364 457 IPR013763 -
Car05g02177 498 SUPERFAMILY Cyclin-like 366 481 IPR036915 -
Car05g02177 498 SUPERFAMILY Cyclin-like 227 363 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02177 Car-Chr5 67021442 67024705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02177 1 479 Core Cell Cycle Gene Families AT1G44110 58.811 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02177 K06627 - gmx:100789565 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02177 05 67021442 67024705 Car05g02177 05 67021442 67024705 ECH