Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02176 ATGTTCACCCGAAGCAAACGCTTCCCTTCTTCTTCGTCTTCAACCTCCGAGAAGAAATCCTCCGTTTCAAATAATACAACTTCGAGCAAAAAGGTTAACGCCGTGAAGACTCGCTCGGCGAAGAAACGTCCCGCTCTCACTGATGTAACCAATAGCAGAAACGCCTCTCTCGCCAAACCAGCCGTTGGTGCACCATCCAAGCCAACGGTTCCATGTGCGTCGAAAACTGCAAAGACCAAGAAGGATTCTGTTGCCAGTTCGCAGAAAAATGTTAAGCCTTGTAGGAACACTTTGCAAGCCTCATCGAGCGTAAAATCAAGTAGGCTTGTACTACCCAAAGAGGCATGTTCCACCAGAGCTAGTAAAACTAAGACTGGAGGAGTTCATGCCTCCATTGCTCCAAGCAATGATGGTGCTGTTTGTCCTGAATTTAAGAGTGTGGTTTGTGCTCCGAGATGGATGGACATTTCTCCAAGTAACTCTTTTAGTGGTTCTGCATCGCTGGACGAGAGCATGTCAACGAGTGATTCTTTTATGAGTTCGGAATTCCAATATACTGGCAACGATGATATTGTATCAATTAAATCAATTGAGAATAGGACATGCAGCATTCTCAATATTTCAGACTCTTCCAAAATAGCTGGTTTAGGTCAAGATATTGACACCATACTGAAGTCAAGAGCAAATGAAATTGTTGACATTGACTGCCATATCAAAGACCCACAGTTTTGCGCATCCATAGCCCATGAAATCTATGAATATTTGCGTGTATCTGAGAAAACTAAAAGGCCGTCTACGAACTTTATGGAGAAGATACAGAAAGACATAAATGCTAGCATGCGGGCAATGCTTATTGATTGGCTTGTGGAGGTCGCTGAAGAGTACAGGCTTCTACCTGATACACTATTTTTGGCAGTTAACTACATTGATCGCTATCTTTCAGGCAAATCAATTAATAGACAGCAGTTTCAACTACTCGGTGTTTCCTGCATGATGATTTCTGCTAAATACGAGGAGATCTGTGCCCCGAAGGTGGAAGAGTTCTGTTATGTAACTGATAATACATATTCTAAGGAGCAGGTGTTGGAGATGGAATCCTCTGTGCTGAAATTCTTGAAGTTTGAAATGACAGCTCCCACAACTAGATGTTTTTTGAGACGCTTCATTATTGTTGCCCAACAAACCTGTGAGGTTCCATTGATGCAGTTGGAGTATTTGGCAGACTATCTTGCAGAGTTATCTCTTCTAGAGTATGATATGCTTCAGTATGCACCATCATTAATAGCTGCATCAGCCACTTTCTTGGCTAAATATATACTACTTCCTAGGAAAAAACCCTGGAACTCTATGCTAAGGCATTACACAGGTTACCAAGCATCAGAATTGTGTGAATGTATTAATGGGTTGTGTTTGTTGTACTGTAATGGCTATCATAGTTCTCCTTCCATTATTGCTATCAGGGAGAAGTACAGTCAACATAAGTTCAAGTTTGTGGCGAAGAAGTATTGTCCTCCATCAATACCAGTAGAAGCATTTCACAACTAA 1545 0.4175 MFTRSKRFPSSSSSTSEKKSSVSNNTTSSKKVNAVKTRSAKKRPALTDVTNSRNASLAKPAVGAPSKPTVPCASKTAKTKKDSVASSQKNVKPCRNTLQASSSVKSSRLVLPKEACSTRASKTKTGGVHASIAPSNDGAVCPEFKSVVCAPRWMDISPSNSFSGSASLDESMSTSDSFMSSEFQYTGNDDIVSIKSIENRTCSILNISDSSKIAGLGQDIDTILKSRANEIVDIDCHIKDPQFCASIAHEIYEYLRVSEKTKRPSTNFMEKIQKDINASMRAMLIDWLVEVAEEYRLLPDTLFLAVNYIDRYLSGKSINRQQFQLLGVSCMMISAKYEEICAPKVEEFCYVTDNTYSKEQVLEMESSVLKFLKFEMTAPTTRCFLRRFIIVAQQTCEVPLMQLEYLADYLAELSLLEYDMLQYAPSLIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELCECINGLCLLYCNGYHSSPSIIAIREKYSQHKFKFVAKKYCPPSIPVEAFHN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02176 514 Gene3D - 250 500 - -
Car05g02176 514 SUPERFAMILY Cyclin-like 379 506 IPR036915 -
Car05g02176 514 PANTHER CYCLINS 30 513 IPR039361 -
Car05g02176 514 CDD CYCLIN 280 369 IPR013763 -
Car05g02176 514 Pfam Cyclin, C-terminal domain 379 500 IPR004367 -
Car05g02176 514 PIRSF Cyclin_A_B_D_E 1 511 IPR039361 -
Car05g02176 514 CDD CYCLIN 377 465 IPR013763 -
Car05g02176 514 Pfam Cyclin, N-terminal domain 250 376 IPR006671 -
Car05g02176 514 SMART cyclin_7 286 370 IPR013763 -
Car05g02176 514 SMART cyclin_7 383 471 IPR013763 -
Car05g02176 514 MobiDBLite consensus disorder prediction 1 91 - -
Car05g02176 514 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 30 513 - -
Car05g02176 514 SUPERFAMILY Cyclin-like 239 376 IPR036915 -
Car05g02176 514 SMART Cyclin_C_2 379 504 IPR004367 -
Car05g02176 514 ProSitePatterns Cyclins signature. 281 312 IPR006671 -
Car05g02176 514 MobiDBLite consensus disorder prediction 1 34 - -
Car05g02176 514 Gene3D - 264 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02176 Car-Chr5 67008537 67013292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02176 116 514 Core Cell Cycle Gene Families AT1G44110 55.309 1.04e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02176 K06627 - jre:108999040 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02176 05 67008537 67013292 Car05g02176 05 67008537 67013292 ECH