Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02162 ATGTATTCAGAGATGAGCAATCTTATTCTAAACTCTGATAATATGGAGGTTGTGGATAGTAGAAAAATACTATTACAGCAACAACACCATTTTCATGTGTTGGCAGTAGATGACAGTCTCACTGATAGAAAGCTTTTAGAGAGGCTTCTTATTGCAGGTTCTTCATGCAAAGTTACATGTGTGGACTCTGGTGATAAGGCTTTGAAATATCTTGGACTCATTGATGAACAAGTACTTCAAAATAATAATAATTCCACAACAAACTCTTTATTAGAATCATCTTCTCCTCCTCAACCATTACAGCTGCAAGAGGGAAGCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGAATGAATGGCTATGATTTACTTAAACGACTCAAGGGATCTTCTTGTAAAGATGTTCCAGTTGTGATCATGTCTTCAGAAAATGTACCTTCCATAGTTAGCATGTGCTTAGAAGAAGGGGCAGAGGAGTTTCTAATTAAGCCTCTTCAGTTATCAGATTTGCAGAAACTTCAGCCTTACTTTGTTAAATCAGTTGAGAATTCTTGTGATGAACAAGAATCAGCAAACAGTTCAACAGATTCTGACAATGATGATCTCATGAGCATCAGCATGaacaataacgataacagtactaacagtaacagtattagcaaaaggaaGGCCATGTCTACTGAGCCTCCAGAGAGATCAAGGCCCAAAATGAAAGGGTTGGCAGTGGTGTAA 738 0.3577 MYSEMSNLILNSDNMEVVDSRKILLQQQHHFHVLAVDDSLTDRKLLERLLIAGSSCKVTCVDSGDKALKYLGLIDEQVLQNNNNSTTNSLLESSSPPQPLQLQEGSKVNLIMTDYCMPGMNGYDLLKRLKGSSCKDVPVVIMSSENVPSIVSMCLEEGAEEFLIKPLQLSDLQKLQPYFVKSVENSCDEQESANSSTDSDNDDLMSISMNNNDNSTNSNSISKRKAMSTEPPERSRPKMKGLAVV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02162 245 MobiDBLite consensus disorder prediction 186 226 - -
Car05g02162 245 ProSiteProfiles Response regulatory domain profile. 32 180 IPR001789 GO:0000160
Car05g02162 245 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 244 IPR045279 GO:0009736
Car05g02162 245 SUPERFAMILY CheY-like 31 174 IPR011006 -
Car05g02162 245 Gene3D - 32 230 - -
Car05g02162 245 Pfam Response regulator receiver domain 88 174 IPR001789 GO:0000160
Car05g02162 245 MobiDBLite consensus disorder prediction 186 245 - -
Car05g02162 245 SMART REC_2 31 176 IPR001789 GO:0000160
Car05g02162 245 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 22 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02162 Car-Chr5 66888163 66890362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02162 23 182 Response Regulator Gene Family AT2G41310 54.658 3.39e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car05g02162 Response_reg 6e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02162 K14492 - gmx:100801334 286.574