Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02159 ATGGCAGAACGTGTGTTACTCACTCCTTCACTACCTTTACCAACTACTAGACCTTCAACAACCACAATGGCTACTATTAGTGGCACCGCCGCCGCTCGCATGATCCCTTCCGCTACCAGAGCCACCGTTTCACTCtcctcttcttcccgttcgtttttctcattttcatcatcttcttcttcggtttcttcGCTGCAATGCTTGCGGTCTTCTCCTCGCATTTCTCACCTGTTTCTCGATCAGCGAAGAGCAGATGTTCGTGTTTCGAGTGGACGCTACGGAACGGCTTCTGTTACAAAGGCTTTAGCATCTGATCCTGATCAGTTGAAGAGCGCTCGAGAAGATATCAAGGAGCTTCTCAGAACTAAGTACTGTCATCCTCTTATGATTCGGTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGCTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACCTATGCAGATTTATTTCAGTTAGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAGATTCCCATGAAATATGGAAGAGTAGATGTCTCTGGACCGGAACAATGCCCTGAAGAAGGGAGACTACCTGATGCAGGCCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTATCGAATGGGATTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGTAGTGGCTGGGGAAAACCTGAGACTAAGTACACGAAAGATGGGCCAGGAGCACCTGGTGGACAATCCTGGACCGCACAATGGTTAAAGTTTGACAACTCATACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGAAGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGATCCAAATTTGATCCTCCAGAGGGAATTGTGATTGATGGTTCTCCAAATGCAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGGAGTAA 1182 0.4399 MAERVLLTPSLPLPTTRPSTTTMATISGTAAARMIPSATRATVSLSSSSRSFFSFSSSSSSVSSLQCLRSSPRISHLFLDQRRADVRVSSGRYGTASVTKALASDPDQLKSAREDIKELLRTKYCHPLMIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGSKFDPPEGIVIDGSPNAEKFVAAKYSSGKE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02159 393 CDD ascorbate_peroxidase 97 367 - -
Car05g02159 393 PRINTS Plant ascorbate peroxidase signature 105 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Plant ascorbate peroxidase signature 126 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Plant ascorbate peroxidase signature 187 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Plant ascorbate peroxidase signature 206 218 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Plant ascorbate peroxidase signature 325 349 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 ProSitePatterns Peroxidases proximal heme-ligand signature. 256 266 IPR019793 -
Car05g02159 393 Pfam Peroxidase 113 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 24 378 - -
Car05g02159 393 PRINTS Haem peroxidase superfamily signature 126 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Haem peroxidase superfamily signature 188 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Haem peroxidase superfamily signature 206 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PRINTS Haem peroxidase superfamily signature 296 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 24 378 IPR044831 GO:0004601|GO:0034599
Car05g02159 393 MobiDBLite consensus disorder prediction 263 294 - -
Car05g02159 393 ProSiteProfiles Plant heme peroxidase family profile. 129 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 SUPERFAMILY Heme-dependent peroxidases 104 365 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car05g02159 393 Gene3D Peroxidase, domain 2 234 357 - -
Car05g02159 393 Gene3D - 112 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02159 Car-Chr5 66841302 66850050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02159 113 364 Peroxidase AT2G22420 27.500 3.93e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02159 K00434 - gmx:100802238 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02159 05 66841302 66850050 Car05g02159 05 66841302 66850050 ECH