Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02158 ATGTCTGGCGAGGAGTATTCAGAGAAAAAGTTTGACGGAGAAGCGGCTTCGTCGCTGGTGAAGGAGTTGAGAGGGAGTTTCAGTTCCGGTAAGACTCAAAGTTATGAATGGAGAATTTCACAAGTTAAGGCTCTTTTGAAAATGGTTGTGGAACAACAGGATCAAATAATTCATGCTCTGCGTTCCGACCTCGCCAAGCCACCGCTCGAAACTGTCGTGTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCACGCTAAAGGAATTGAAACAATGGATGGCACCAGAAAAGGTTAAATCTTCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGTGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTTTTGCTATCCCTTGATCCAGTTGTTGGAGCTATAGCAGCAGGTAATGCTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCATCATCTTCACTGCTGGCAAAATTGTTAGGGAAGTACATGGATAACTCATCTATAAGAGTTGTTGAAGGGGCAGTTGATGAAACTACTGCATTGTTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAAAGTGGGAAGGATAGTGATGGCTGCAGCTGCAAAACACCTTACACCAGTTGTTCTTGAGCTTGGAGGAAAATCTCCAACTGTTGTTGATTCAAATGTCAATTTAGAGGTTACAGCTAGAAGGATAATTTCTGGCAAGTGGGGCTGTAACAACGGACAAGCCTGCATTTCTCCTGATTACATTATAACAACAAAAGACTTTGCTCCATTGTTGGTAGATGCCTTAAAGACTGAGTTGGAAAACTTCTTTGGAAAGAATCCATTAGAATCAAATGATCTGTCGCGGATTGTGAGTTCTAACCACTTCAATCGCTTGATAAAGCTCATGGATGAGGATAAGGTTTCTGACAAAATTGTTTATGGTGGTGCAAAAGATGAAAGCAAATTGAGGATTGCTCCTACTATTTTATTAGACGTTCCACGAGATTCACTGATAATGAGTGAGGAGATCTTTGGTCCATTGCTTCCCATCATCACAGTGAATAAGCTGGAAGAAAGCTTCGATGTGATAAACTCCGGAACAAAGCCACTAGCAGCATATTTATTTACAAATGACAATAAGTTCAAGGAACAATTTGTGAAGAAAGTTTCTGCTGGTGGTTTGCTTATCAATGACACTGTCTTACATCTTGTGGTTTGTACTTTGCCATTTGGGGGAGTTGGAGACAGTGGAATGGGTGCATACCATGGAAAATTCTCCTTTGATGCTTTTACTCACAGAAAGGCGGTACTTTATCGCGGTTTTACAGGCGATTCATCTTTAAGGTACCCACCTTACACGGATACAAAGCAGAAATGTATGAAGGCTCTAGTTGCCGGTGATGTCCCCGGTATTGTTCGTGCTCTTTTCGGATGGTCCTAG 1467 0.4138 MSGEEYSEKKFDGEAASSLVKELRGSFSSGKTQSYEWRISQVKALLKMVVEQQDQIIHALRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKVKSSITTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLAKLLGKYMDNSSIRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSNVNLEVTARRIISGKWGCNNGQACISPDYIITTKDFAPLLVDALKTELENFFGKNPLESNDLSRIVSSNHFNRLIKLMDEDKVSDKIVYGGAKDESKLRIAPTILLDVPRDSLIMSEEIFGPLLPIITVNKLEESFDVINSGTKPLAAYLFTNDNKFKEQFVKKVSAGGLLINDTVLHLVVCTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDSSLRYPPYTDTKQKCMKALVAGDVPGIVRALFGWS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02158 488 CDD ALDH_F3FHI 16 447 - -
Car05g02158 488 PANTHER ALDEHYDE DEHYDROGENASE 8 488 - -
Car05g02158 488 Pfam Aldehyde dehydrogenase family 18 445 IPR015590 GO:0016491
Car05g02158 488 PANTHER ALDEHYDE DEHYDROGENASE 8 488 IPR012394 GO:0006081
Car05g02158 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 443 IPR016162 GO:0016491
Car05g02158 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Car05g02158 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Car05g02158 488 SUPERFAMILY ALDH-like 19 456 IPR016161 GO:0016491
Car05g02158 488 PIRSF ALDH 4 482 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02158 Car-Chr5 66811173 66817330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02158 11 488 Aldehyde Dehydrogenase Gene Family AT4G34240 65.481 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02158 K00128 - gmx:100783726 792.727