Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02154 ATGGCATCAGAGCTTCAATTGCCGCCAGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTCATGCACTATCTCTGCCGCAAATGCACTTCGCAACCCATCTCTGTTCCCATCATCGCCGAAATTGACCTCTATAAGTACGATCCTTGGGATCTTCCTGGCATGGCTTCTTATGGAGAAAAGGAGTGGTATTTTTTCTCGCCACGAGACAGGAAATATCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGATCCGGATATTGGAAGGCAACCGGGGCGGATAAACCCATAGGTCACCCGAAACCGGTTGGGATTAAGAAAGCGTTGGTGTTTTACGCGGGGAAAGCGCCAAAAGGTGATAAAACAAATTGGATTATGCACGAGTATCGTTTGGCTGACGTGGATCGCTCCATTCGAAGAAAGAACAGCTTAAGGCTGGATGACTGGGTGCTTTGTCGTATTTACAATAAGAAAGGCACAATCGAGAAACAACCGAACAGCGGTGTTATAAACAGGAAAACAGACCCCTCGGAAATCGAAGACAAGAAGCCAGAGATTCTGACACGTGGAAGCGGTCTTCCGCCACACCCTCCACCGCAAGCGACGGCGGGAATGAGGGATTACATGTATTTCGACACATCAGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGTTCAGAACACGTGGTGTCGCCGGAGTTTGCAAGCGAGGTGCAAAGCGAGCCTAAATGGAACGAATGGGAAAAGCACCTTGAATTTCCTTATAATTACGTGGATACCACTCTGAACAGTGGTTTCGGGTCCCAATTCCAGAGCAATAATCAGATGTCCCCGTTGCAGGATATGTTCATGTACTTGCCAAAAACCTTTTGA 876 0.4932 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPISVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSIRRKNSLRLDDWVLCRIYNKKGTIEKQPNSGVINRKTDPSEIEDKKPEILTRGSGLPPHPPPQATAGMRDYMYFDTSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKHLEFPYNYVDTTLNSGFGSQFQSNNQMSPLQDMFMYLPKTF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02154 291 PANTHER NAC TRANSCRIPTION FACTOR 56 2 269 - -
Car05g02154 291 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Car05g02154 291 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Car05g02154 291 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Car05g02154 291 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Car05g02154 291 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 269 - -
Car05g02154 291 MobiDBLite consensus disorder prediction 165 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02154 Car-Chr5 66759753 66762400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02154 1 291 NAC Transcription Factor Family AT1G01720 70.432 2.63e-148 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car05g02154 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02154 - - gmx:100805768 520.776