Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02152 atgacacaaaaaacgagtaaCCGTCCAGTAGTTGTTAATACATCAGGATGGAGAAAGTTCATGTCATATGTAGGCCCCGGCTTTCTTGTCTCATTGGCATACTTTGATCCTGGAAACATATATGTTTGTGTGCTAATTGGACTCATATTTGCGCTTATAATTCAATCGTGGGCTGCAAATCTTGGAGTATGCACTGGAAAACACCTTTCAGAAATTTGTAAAGCTGAGTATCCATTATTTGTGAAGTACTGCTTATGGATATTAGCTGAGCTTGCTGTCATTGCTGCAGACATACCTGAAGTTATTGGGACAGCCTTTGCCCTTAGCATACTATTCAAAATCCCAGTATGGGTTGGAGTTTTGATAACTGGCTGCAGCACTCTCTTGTTTTTGGGTCTGCAAAGATTTGGGGTAAGGAAATTGGAACTCTTGATATCAATATTAGTATTTGTAATGGCTGTATGTTTCTTTGGAGAAATGAGCTACGTAAAACCCCCAACTTCTGGTGCCATAGAGGGAATGTTTGTCCCTAAACTCAATAGAGATGGAGCTGTAGCAGATTCTATTGCCCTTTTGGGTGCCCCTATCATGCCATACTTTCTCATTGAGAGTGCATTTGCTTTGTTTGTGGCATTTCTAATCAATGTTGCAATGATTTCTGTGTCTGGCACGGTTTGCTCTGCCGATAACCTATCTGCAGAAAACGCTGATCGTTGCAGTGATCTTACTCTTAACTCTGCTTCTTTCCTTCTTCAAGCTTCTAATTTAATTCACTATATAATAAACTCAACAATTTATGCCATAGCTTTTGCTAGCCTCAGGACAAAGTTCTGCCATCATTGGAACCTATGCAGGACAGTTTATCATGGTTTCTTGGATTTAAAGATGAAAAAACGGATTAGGAACTTGGTGACTAGGATTATTGCCATAGCACCTAGTCTTGTTGTCTCTATCATTGGTTGTTCCTCTGGGAGCTGGAAAGCTTATTGTTATTGCATCGatgatactttcttttga 1017 0.3874 MTQKTSNRPVVVNTSGWRKFMSYVGPGFLVSLAYFDPGNIYVCVLIGLIFALIIQSWAANLGVCTGKHLSEICKAEYPLFVKYCLWILAELAVIAADIPEVIGTAFALSILFKIPVWVGVLITGCSTLLFLGLQRFGVRKLELLISILVFVMAVCFFGEMSYVKPPTSGAIEGMFVPKLNRDGAVADSIALLGAPIMPYFLIESAFALFVAFLINVAMISVSGTVCSADNLSAENADRCSDLTLNSASFLLQASNLIHYIINSTIYAIAFASLRTKFCHHWNLCRTVYHGFLDLKMKKRIRNLVTRIIAIAPSLVVSIIGCSSGSWKAYCYCIDDTFF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02152 338 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car05g02152 338 PANTHER METAL TRANSPORTER NRAT1-RELATED 10 199 - -
Car05g02152 338 PANTHER METAL TRANSPORTER NRAT1-RELATED 199 325 - -
Car05g02152 338 PRINTS Natural resistance-associated macrophage protein signature 138 159 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car05g02152 338 PRINTS Natural resistance-associated macrophage protein signature 85 111 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car05g02152 338 PRINTS Natural resistance-associated macrophage protein signature 301 318 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car05g02152 338 PRINTS Natural resistance-associated macrophage protein signature 113 132 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car05g02152 338 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 199 325 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car05g02152 338 Pfam Natural resistance-associated macrophage protein 43 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02152 Car-Chr5 66736839 66740194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02152 1 327 Inorganic Solute Cotransporters AT1G80830 47.154 8.37e-104 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02152 K21398 - gmx:100787785 427.557