Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02143 ATGAATTCGCCGTCCGCGCAGTTCGTTTCATCGAGAAGGATGAGTGTGTATGATCCTATTCACCAGATTAATATGTGGGGAGAAGGCTTCAAAAGTAATGGCAATTTAAGTGCGTCCCTGCCATTAATCGATGAGGCAGACTTGAAGTTTGATAGTAGTCAGTCAGAGGATGCTTCTCATGGTATACTAGGAACATCTCACAAGTATGACCAAGAAGCTAATAGACCTATTGATAAGATACAAAGGCGTCTTGCGCAAAATCGAGAGGCTGCTCGTAAGAGCCGTCTGCGGAAAAAGGCTTATGTGCAGCAGTTAGAATCAAGTCGTTTGAAGTTGATGCAGTTGGAGCAAGAGCTTGAACGTACAAGACAGCAGGGAATGTATATGGGTGGTGGGTTAGATTCTAATAATATGTGTTTTGCTGGACCTGTGAATTCAGGAATTACAGCCTTTGAGATGGAGTATGGACATTGGGTTGACGAGCAAAATAGGCAAATCTCAGAAATGAGAAATGCCTTAAATGCGCATATTGGTGACATAGAGCTCAGGATTCTAGTAGAAGGTATGATGAACCACTATGCTGAAATCTATCGCATGAAATCAGCTGCTGCAAAAGCAGATGTTTTTTATGTTATGTCCGGCATGTGGAAAACAACAGCTGAAAGATTTTTCTTGTGGATCGGAGGTTTTCGCCCCTCTGAGCTTCTCAAGATTCTTGGTCCAATGATTGAACCCTTGACAGAGCAACAACGATTGGATATCGATAACCTTGGACAATCATGTCAACAAGCAGAAGACGCCCTTTCACAAGGCATGGACAAACTCCGGCAAACACTCGCTGATAGTGTAGCAGCTGGACAATTCATTGAAGGAACTTATATTCCGCAGATGGCTTCTGCAATGGAGAAGTTGGATGCTCTTGTGAGCTTTGTGAACCAGGCTGACCATCTTCGGCAGGAAACCTTGCAGCAAATGTCTCGAATACTTACGATCCGTCAGTCGGCTCGATGCTTGCTTGCTTTGGGAGAATATTTCCAACGCTTGAGGGCTTTGAGCTCACTATGGTCTAATCGACCCCGCGAACCTGCTTAG 1092 0.4441 MNSPSAQFVSSRRMSVYDPIHQINMWGEGFKSNGNLSASLPLIDEADLKFDSSQSEDASHGILGTSHKYDQEANRPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERTRQQGMYMGGGLDSNNMCFAGPVNSGITAFEMEYGHWVDEQNRQISEMRNALNAHIGDIELRILVEGMMNHYAEIYRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKILGPMIEPLTEQQRLDIDNLGQSCQQAEDALSQGMDKLRQTLADSVAAGQFIEGTYIPQMASAMEKLDALVSFVNQADHLRQETLQQMSRILTIRQSARCLLALGEYFQRLRALSSLWSNRPREPA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02143 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 121 IPR004827 GO:0003700|GO:0006355
Car05g02143 363 CDD bZIP_HBP1b-like 79 131 - -
Car05g02143 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Car05g02143 363 Gene3D - 78 128 - -
Car05g02143 363 Coils Coil 98 125 - -
Car05g02143 363 PANTHER TRANSCRIPTION FACTOR TGA1 1 362 - -
Car05g02143 363 PANTHER TRANSCRIPTION FACTOR TGA9 1 362 - -
Car05g02143 363 MobiDBLite consensus disorder prediction 56 75 - -
Car05g02143 363 ProSiteProfiles DOG1 domain profile. 148 358 IPR025422 GO:0006351|GO:0043565
Car05g02143 363 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Car05g02143 363 SUPERFAMILY Leucine zipper domain 79 122 IPR046347 GO:0003700|GO:0006355
Car05g02143 363 Pfam bZIP transcription factor 79 115 IPR004827 GO:0003700|GO:0006355
Car05g02143 363 SMART brlzneu 75 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02143 Car-Chr5 66641543 66644669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02143 1 363 Calmodulin-binding Proteins AT5G65210 68.478 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g02143 DOG1 4.5e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02143 05 66641543 66644669 Car05g02143 05 66641543 66644669 ECH
Car06g00767 06 7597051 7600415 Car05g02143 05 66641543 66644669 PCT