Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02141 ATGGCTGATCACTCAGACACCTCTCCTCTTGTGCCTCCAATTCCTCTCTCTGACCCTTCCGAGATCGACCTCGAAGCAGGTCCTTCCGAACAAATTCAGTGCCGGATTTGTCTCGAAACTGATGGTAGGGATTTCATAGCTCCTTGTAAGTGCAAAGGTACTTCAAAATATGTTCATCGAGATTGTTTGGATCACTGGCGATCTGTCAAGGAAGGGTTTGCATTTGCTCACTGCACTACCTGCAAGGCTCCATATCATTTGCGTGTTCATGTTGCTGCTGATAGGAAATGGAGAACCATGAAATTTCGTTTTTTCGTCACCAGAGATATTTTGTTTATTTTTATGGCTGTCCAGCTTATTATTACCTCACTGGCATATTTGGTTTATCTAATAGATGGTTACCAGAAAAGTTGGCTTCGTATTCTCTGGCATTTTGACAGTGAACTGAGCTTCTATTACATATGTGGAGCTCTATTGTTTTTTGCCTTGCTTGGCCTCTCCGGGTGCTTCATTACTTGTTACGATCGAAGAGTTCGCAATGATTTGGCGCAACCTTGCAGAGAATTATGTCTTTGTTGCTGCACTCTTTGTATGTGGACTGATTGCACCGCATGCTTTGAGAGTTGTGGAACCATGGCAACAGAATGTGGTGGTTGTTTGGGAGGTGCTGGGGAAGCAGGGCTACCATTATTGTTCATAATGGCTTTGATTGTTCTGGGACTTTTTACAGTAATTGGTATATTTTACAGTGTATTGGTGGCAACTATGGTGGGCCAACGGATATGGCAACGTCACTATCACATACTTGCAAAAAGGATGTTAACAAAGGAGTATGTGGTTGAAGATGTAGATGGAGAGATGACTGGGTCTGATTGGTCTCCCCCCTCCCTCCCACCTGAGCATGTTCAACAATTGAAAACATTGGGCCTCTTATGA 936 0.437 MADHSDTSPLVPPIPLSDPSEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRDCLDHWRSVKEGFAFAHCTTCKAPYHLRVHVAADRKWRTMKFRFFVTRDILFIFMAVQLIITSLAYLVYLIDGYQKSWLRILWHFDSELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCTLCMWTDCTACFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPSLPPEHVQQLKTLGLL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02141 311 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
Car05g02141 311 PANTHER BNAA04G12620D PROTEIN 1 311 - -
Car05g02141 311 SUPERFAMILY RING/U-box 29 86 - -
Car05g02141 311 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Car05g02141 311 CDD RING_CH-C4HC3_MARCH 34 82 - -
Car05g02141 311 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 311 - -
Car05g02141 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 96 IPR013083 -
Car05g02141 311 SMART ringv_2 33 82 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02141 Car-Chr5 66625553 66630737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02141 1 311 C3H Transcription Factor Family AT2G22120 81.790 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02141 - - gmx:100791777 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02141 05 66625553 66630737 Car05g02141 05 66625553 66630737 ECH