Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02135 ATGGCGACCACAATGCCTTGGAGATTTGCCGTCAACAATGGTAGTAGCCTTGCTGTTAATGATTTGGAAAGAAATGGTGATGGAAAGGCTCAAGATTCAGAGGCTCCAACTCCCCATTCTGTTCTGAAAATGGGATTGAGAGAACGTAGCAGCAGCGGCATGGAGGATGCAGATGGGACATTAGCTAGTATTGCTCAATGCATTGAGCAGCTGCGTCAGAGTTCATCTTCTATGCAAGAGAAAGAGTATTCCTTGCAGCAATTATTGGAGCTTATTGATACACGTGAAAATGCTTTTAGTGCAGTTGGATCTCATTCTCAGGCGGTTCCGGTGCTTGTTTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTTTGTAAAGAAAATGAGCTAAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCTCCTTTGCTCGGTCTACTGAAGTCCAGTTCTGAAGAAGGTCAAGTAGCTGCTGCAAAGACAATTTTTGCTGTCTCTCAAGGTGATGCCAAAGATCATGTTGGATCAAAAATCTTTTCAACTGAGGGAGTTGTTCCGGTGCTCTGGGAACAGCTACAAAAGGGCCTGAAGAGTGGAAGTGTAGTGGATAGTTTGTTGACTGGAGCATTGAAAAATCTCTACAACAGTACTGAGAGATTCTGGAATGCCACAATACAGGCTGGAGGAGTGGACATATTACTGAAGTTACTTACAACAGGACAGTCTAGCACTTTAGCTAATGTGTGCTTTTTACTTGCCTGTATGATGATGGAAGATGCAACTTTTTGTTCAAAGGTATTGACAGCAGATGCAACAAAACAGCTCCTCAAACTTTTAGGTCCTGGTAATGATGCCCCAGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTATCTGCCCAGTGCCAAGATGCAAGGAAAGAGATAGCCAATTCTAATGGCATTCCTGCTTTGATTAATGCTACCATAGCTCCTTCTAAAGAGTTTATGCAAGGTGAGTATGCTCAAGCAATACAGGAGAATGCCATGTGTGCTCTTGCGAATATCTCTGGCGGTTTGTCTTATGTCATCTCTAGCCTTGGTCAAAGCCTTGAATCGTGCTCCTCACCGACCCAAACAGCCGACACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGATGACAAGGCAGAATCTACCAGATCATCAGATCCTTTGGCAGTTGAGCAGACTTTACTCGAGCAATTTAAACCTCGCTCGGCCTTCCTTGTGCAGGAAAGGACCATTGAAGCCCTTGCTAGTTTGTATGGCAATCCTATACTCTCACTTAAACTTGCAAATTCTGATGCCAAACGTTTGCTTGTTGGTTTAATAACAATGGCTGCTAATGAAGTACAAGATGAGCTTCTAAAAGCTCTCTTGACACTGTGCAATAGTGAATGCAGTCTATGGCGCGCACTTCAAGGCCGTGAAGGAGTTCAGCTATTGATATCTCTTCTGGGGCTTTCATCAGAACAACAACAAGAATGTGCTGTTGCCTTGCTCTGTCTTTTGTCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCACCACTTGTTCAAATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGACTCTGCAACAATCCTTAGGAACCTATGTGATCACAGTGAGGATATACGTGCTTGTGTTGAAAGCGCTGATGCAGTTCCTGCATTATTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAAGAGATTGCGGCTAAGACCTTGAATCATTTAATTCATAAATCTGATACAGCAACTATCAGTCAGCTTACAGCACTTTTGACTAGTGATCTACCTGAATCTAAGGTTTATGTTTTAGATGCTTTGAGGAGTATGCTTTCTGTTGTTTCTCTTAGTGACCTTCTACGTGAAGGTAGTGCTGCCAGTGATGCGGTTGATACAATGATAAAATTATTGAGCTCAACTAAGGAAGAAACTCAGGCAAAGTCTGCATCAGCTTTGTCAGGAATTTTTCAAGCAAGGAAAGATGTGCGAGAAAGCAACATTGCTGTTAAAACTCTTTGGTCAGCCATGAAGTTGCTTAATGTTGAATCAGGAATTATCTTAATGGAGTCCTCACGCTGTCTAGCTGCAATATTTCTTTCCATCAAAGAAAACAGGGAGGTAGCTTCTATTGCTAGAGATGCGTTATCCTCCCTAATTGCACTAGCTAGTTCATCATTTTTGGAAGTAGCAGAGCTAGCGATATGTGCTGTTGCAAATCTTTTTTTGGATAGTGAAATTGCTGAGAAAGCTATTGCAGAGGAAGTTATTTTGCCTGCTACCAGAGTATTGCGTGAAGGCACAAAATCTGGAAAAACACATGCAGCAGCAGCCATTGCTCGCCTTTTGCATTCCAGGCAAGTTGATTATGCTGTAAATGATTGTGTGAACCGTGCTGGTACTGTTCTTGCATTAGTTTCTTTCTTAGACTCTGCTATAAATGAACCTGTTGCGACAACAGAGGCTCTAGAAGCACTTGCCATTCTGTCCAGGTTGAAAGAGACCACTGCACTTAATAAACCTGCTTGGCTGATTTTGGCCGAATTCCCTAAAAGCATAAGCCCAATAGTTTTGTCAATTGCTGATTCAACACCAGCGTTGCAGGATAAAGCTATTGAAATATTATCTCGATTATGCATGGATCAGCCTTCTGTGTTGGGAGAGACCGTTGCTACTGCATCTGGATGTATATCTTCAATAGCTAAGAGGATAATCAATTCTGCTTCTACAAATGTAAAGGTCAAAATTGGGGGAGCGGCAATTCTTATTTGTGCTGCTAAAGAAAATCATCAGAAGCTGGTGGAGGATCTAAATTTATCAAACTTGTGTGCTAATCTTATACAGTCGCTTGTCGATATGCTTATTTCTTCACAGGCTACTTGGGTTAATGAGGGCGATGATGACAACAAGGAAGTCATCAGCATTTGCAGGCATACAAAAGAAGCCGATGATGGTAAATTCACCAAAAGCACCGCCGTTATATCTGGTGCCAATGTAGCTATATGGTTACTGTCTGTTCTTGCTTGTCATGACAAAAAAGGTAAAGTTGCAATAATGGAGGCTGGAGCGATTGAGATTCTCACTGACAGGATTGGAAATTTTTCCTCACAATACAGTCAGATTGACTATAAAGAAGATAGCAGCATGTGGATTTGTGCTTTGTTGTTGGCAATATTATTTCAAGATAGGGATATCATACGAGCACATGCAACAATGAAATCTATACCAGCCCTTGCCAACTTATTGAAGTCAGAGGAATCTGCAAACAAATATTTTGCTGCACAATCAATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTTCTATCTGTGGCAAATTCTGGGGCGGCAGGTGGACTTATCTCCTTTCTTGGCTGTGCTGATGTTGATATACAGGATCTTCTGGAATTGTCAAATGAATTTTTGTTGGTGCCGTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTGGATGACATTAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGTCCTAGTTGATCTTCTCAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGTTTTTGACTCAGCTTGCTAGAGACTGTCCATCAAATACGATTGTAATGGTAGAGTCTGGGGCCATAGAGGCACTTACCAAGTATCTTTCACTGGGTCCACAAGATGCAACCGAAGAAGCTGCTACAGATCTGTTAGGAATTTTGTTTAGTAGTGCTGAGATAAGGAGACACGAGTCAGCATTTGGTGCTGTTGCTCAACTTGTAGCTGTGCTTCGTTTAGGAGGAAGAGCTGCAAGGTATAGTGCTGCTAAAGCCTTGGAAAGTTTATTCTCGGCTGACAACATTAGAAATGCAGAGAGTGCCCGACAAGCTGTTCAACCCTTGGTGGAAATTCTTAATACTGGTTTAGAGAGAGAGCAATATGCTGCAATCGCTGCATTAGTTAAGTTACTGAGTGAAAATCCTTCAAGAGCACTCGCTGTTGCTGACGTTGAGATGAATGCCATTGATGTTCTGTGCAGAATTCTTTCAACAGATTGTTCAATGGACCTCAAAGGGGATGCTGCTGAATTATGTTGTGTTCTTTTTGGAAATACACGGATTCGATCCACAATGGCAGCTGCACGGTGTGTTGAACCTCTTGTCTCTCTACTTGTAACTGAGTTTAGTCCTGCTCAGCTTTCAGTTGTCCGGGCATTGGATAGGCTTGTTGGGGATGAGCAATTGGCTGAATTAGTTGCTGCACATGGTGCAGTTATTCCTCTCGTTGGCCTACTGTATGGTAGGAACTTTGTACTTCATGAGGCCATATCCAGAGCTCTGGTCAAGTTAGGAAAAGATAGGCCAGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTCATTGAAAGCATACTTGACATCCTTCATGAAGCACCTGATTATCTCTGTGCAGCTTTTGCAGAATTGCTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGATCATCGGCTGCTAAAGTAGTTGAACCCCTGTTCTTTTTGCTAACAAGACAAGAATTTGGCCCCGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAGCATCCACAGTGCCGTGCTGATTACACATTAACTTCCAACCAAGCCATTGAACCACTCATTCCCTTGCTTGATTCTCCAATAGAAGCAGTGCAACAGTTGGTTGCTGAGCTTCTCTCACACCTACTTTTAGAAGAACACCTTCAGAAGGACCCAGTGACACAGCAAGTAATTGGCCCTCTTGTGCGAGTTCTTGGTTCTGGCATACAAATATTGCAGCAGAGAGCTTTGAAGGCCCTTGTCAGTATTGCAATTATATGGCCAAATGAAATTGCCAAAGAGGGCGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCTGACCCTTCCATTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTGGCAAGTATTCTGCAATTTAGTTCTGAATTCTACTTGGAAATTCCTGTTGCTGTTTTGGTAAGGTTGCTTCGATCTGGATCAGAGAGTACAGTTAGTGGTGCATTAAATGCTCTTCTCGTGTTGGAAAGTGATGATGGAACTAGCGCAGAGGCAATGGCTGAAAGCGGTGCCATAGAGGCTCTCTTGGAGCTCCTAAGATCTCATCAGTGTGAGGACACTGCTGCAAGACTCTTAGAAGTATTGCTGAACAATGTAAAGATTAGAGAAACAAAAGTTACTAAATCAGCCATCTTACCATTATCCCAGTACCTCTTGGACCCACAAACTCAAGCACAGCAAGCAAGGTTATTAGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGTCTTGCTCGGACAGCTGATGCAGTTTCAGCCTGTCGGGCTTTGGTAAATGTGCTTGAAGACCAACCAACTGAAGAAATGAAAGTCGTTGCCATATGTGCTCTGCAAAACCTTGTGATGTACAGCCGATCAAATAAAAGAGCAGTTGCAGAGGCCGGTGGTGTTCAGGTTATACTGGATCTGATTGGTTCGAGTGATCCTGACACATCAGTCCAGGCTGCAATGTTTATTAAACTTCTCTTTTCAAATCATACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCGATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAACGGTGAACGACGAGTATCTTAAAGCCTTAAATTCTCTATTTAGCAACTTCCCACGACTGAGAGCAACTGAACCAGCAACACTTAGCATTCCACATCTGGTTACATCCTTAAAGACAGGTTCAGAGGCTACTCAAGAAGCTTCTTTGGATGCACTTTTCCTGCTCAGGCAAGCTTGGTCAGCGTGCCCAGCGGAAGTTTCAAGAGCTCAGTCCATAGCAGCCGCAGATGCTATTCCTTTGTTACAGTACTTAATCCAGTCTGGCCCACCCCGGTTTCAGGAGAAGGCAGAATTTCTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATTATCAAGTCTGGTAATAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGAAACACTCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCCAACCCAGAGTGGGATGAGAGTTTCTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAACAAGAGCAAAATGGGGAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGGGTGGTGATGCTAGGGGCAGTTTCTGGAGAGTATACTCTGTTACCGGAAAGTAAAAGTGGCCCCTCAAGAAATTTAGAAATAGAATTTCAATGGTCTAACAAGTGA 6465 0.4308 MATTMPWRFAVNNGSSLAVNDLERNGDGKAQDSEAPTPHSVLKMGLRERSSSGMEDADGTLASIAQCIEQLRQSSSSMQEKEYSLQQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSEEGQVAAAKTIFAVSQGDAKDHVGSKIFSTEGVVPVLWEQLQKGLKSGSVVDSLLTGALKNLYNSTERFWNATIQAGGVDILLKLLTTGQSSTLANVCFLLACMMMEDATFCSKVLTADATKQLLKLLGPGNDAPVRAEAAGALKSLSAQCQDARKEIANSNGIPALINATIAPSKEFMQGEYAQAIQENAMCALANISGGLSYVISSLGQSLESCSSPTQTADTLGALASALMIYDDKAESTRSSDPLAVEQTLLEQFKPRSAFLVQERTIEALASLYGNPILSLKLANSDAKRLLVGLITMAANEVQDELLKALLTLCNSECSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVSLSDLLREGSAASDAVDTMIKLLSSTKEETQAKSASALSGIFQARKDVRESNIAVKTLWSAMKLLNVESGIILMESSRCLAAIFLSIKENREVASIARDALSSLIALASSSFLEVAELAICAVANLFLDSEIAEKAIAEEVILPATRVLREGTKSGKTHAAAAIARLLHSRQVDYAVNDCVNRAGTVLALVSFLDSAINEPVATTEALEALAILSRLKETTALNKPAWLILAEFPKSISPIVLSIADSTPALQDKAIEILSRLCMDQPSVLGETVATASGCISSIAKRIINSASTNVKVKIGGAAILICAAKENHQKLVEDLNLSNLCANLIQSLVDMLISSQATWVNEGDDDNKEVISICRHTKEADDGKFTKSTAVISGANVAIWLLSVLACHDKKGKVAIMEAGAIEILTDRIGNFSSQYSQIDYKEDSSMWICALLLAILFQDRDIIRAHATMKSIPALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISFLGCADVDIQDLLELSNEFLLVPYPDQVALERLFRVDDIRVGATSRKAIPVLVDLLKPIPDRPGAPFLALGFLTQLARDCPSNTIVMVESGAIEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVAQLVAVLRLGGRAARYSAAKALESLFSADNIRNAESARQAVQPLVEILNTGLEREQYAAIAALVKLLSENPSRALAVADVEMNAIDVLCRILSTDCSMDLKGDAAELCCVLFGNTRIRSTMAAARCVEPLVSLLVTEFSPAQLSVVRALDRLVGDEQLAELVAAHGAVIPLVGLLYGRNFVLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGSSAAKVVEPLFFLLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSNQAIEPLIPLLDSPIEAVQQLVAELLSHLLLEEHLQKDPVTQQVIGPLVRVLGSGIQILQQRALKALVSIAIIWPNEIAKEGGVIEISKVILQADPSIPHALWESAASVLASILQFSSEFYLEIPVAVLVRLLRSGSESTVSGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEDTAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTADAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSDPDTSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEASLDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKSGNNMKQSVGNPSVYCKLTLGNTPPRQTKVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGEYTLLPESKSGPSRNLEIEFQWSNK 2154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02135 2154 SUPERFAMILY ARM repeat 1627 2031 IPR016024 -
Car05g02135 2154 Gene3D C2 domain 2033 2154 IPR035892 -
Car05g02135 2154 Gene3D - 653 875 IPR011989 -
Car05g02135 2154 Gene3D - 876 1172 IPR011989 -
Car05g02135 2154 SUPERFAMILY ARM repeat 1028 1160 IPR016024 -
Car05g02135 2154 SMART arm_5 1442 1482 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1733 1772 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 526 566 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1860 1900 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 269 310 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 137 177 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1232 1273 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1187 1230 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 568 608 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 94 136 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1612 1651 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1401 1441 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 734 772 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1314 1355 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1568 1610 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 647 687 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 1484 1524 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 818 860 IPR000225 GO:0005515
Car05g02135 2154 SMART arm_5 312 361 IPR000225 GO:0005515
Car05g02135 2154 Coils Coil 298 318 - -
Car05g02135 2154 Gene3D - 1366 1651 IPR011989 -
Car05g02135 2154 Gene3D - 1181 1365 IPR011989 -
Car05g02135 2154 SMART C2_3c 2034 2130 IPR000008 -
Car05g02135 2154 ProSiteProfiles C2 domain profile. 2014 2131 IPR000008 -
Car05g02135 2154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2032 2151 IPR035892 -
Car05g02135 2154 SUPERFAMILY ARM repeat 68 390 IPR016024 -
Car05g02135 2154 CDD C2 2035 2125 - -
Car05g02135 2154 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2154 - -
Car05g02135 2154 Gene3D - 408 652 IPR011989 -
Car05g02135 2154 Pfam Armadillo/beta-catenin-like repeat 105 135 IPR000225 GO:0005515
Car05g02135 2154 Pfam Armadillo/beta-catenin-like repeat 526 566 IPR000225 GO:0005515
Car05g02135 2154 SUPERFAMILY ARM repeat 1189 1571 IPR016024 -
Car05g02135 2154 SUPERFAMILY ARM repeat 427 735 IPR016024 -
Car05g02135 2154 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 537 579 IPR000225 GO:0005515
Car05g02135 2154 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2154 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Car05g02135 2154 Gene3D - 1655 2032 IPR011989 -
Car05g02135 2154 SUPERFAMILY ARM repeat 660 988 IPR016024 -
Car05g02135 2154 Gene3D - 52 407 IPR011989 -
Car05g02135 2154 Pfam C2 domain 2033 2129 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02135 Car-Chr5 66559969 66570503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02135 489 621 U-box Gene Family AT2G23140 40.741 4.63e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02135 - - gmx:100816765 3674.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02135 05 66559969 66570503 Car05g02135 05 66559969 66570503 ECH
Car06g00772 06 7656241 7666933 Car05g02135 05 66559969 66570503 PCT