Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02130 ATGGATCTTGAGAATGAGAAGAATGACATTGGCAGGGACAGCATTGCACTATGGGTGTTGAATCCTCCAGAGCCACCATGTATGCTGTATCGAATCTTGAAAAATCTAAAGGAAGCTCAACTGGGTGTTACATTATTTTCTCTTAAACATCAAAATTCGCCCAAAATAGTATTCACCTTCTTGCAAGCTCTGTTTCCAATCTTTGCTTCATTCAAAAACTACAATGTTCACAAATTCAAGTCTGATGTCTTGGGGGGTCTAATCCTAGCAATCTTTGCTATTCCACAGGCTATGGCAAATGCGAGTTTGGCAAATATGAGTCCTGAGTATGGCCTATATACTAGTATTGTTCCACCTCTTGTTTATGCTTTGATATCGAGTTCAAGGGAGATAGTGATTGGACCTGCAACTGTGGATTCACTCTTACTTTCATCAATGATTCAAACTTTGAAAGATCCCATTCATGATTCCATTGCTTACACTCAACTTGTTTTGACTGCAACTTTCTTTACTGGTGTCTTTCAAGTTGCTTTCGGATTCTTCAGGTTTGGGTTTCTAGTAGATTATCTTTCTGATGCTACAATGGTGGGGTTCTTGCAAGCAGTTGCGATAGGCATTGTACTACAACAATTGAAAGGATTATTTGGGATTGTCAACTTTACTAGCAAGAGTGATTTATTCTCTGTGATTAAATCTCTTTGGACATCCTACAAAAACAAATCAAAGTGGCATCCTTGCAATTTTATTATTGGATTCTCATTTTTGTCTTTCATCCTATTTACCAGACTCCTGGGGAGAAGGAAAAAGAAACTTGTGTGGCTGTCACATATTGCTCCTATTCTTTCATTCATTATATCCTCTGCTATTGCATATAAAGTAAATGTTCATGAACTAAAAATTGAGGACTACAAAATTGAAGTCTTAGGACCAATCAAAGGAGGTAGCTTGAATCCAAACTCAATCAACCAATTACAACTTGATAGTAATGGTAAATATTTGGGTCCTTTGATCAAAATAGGGTTGACTGTTGCTATTATTTCAACCACGCAATGTGTAGCTGTTGGCAGATTATTTGCATCTCTAAGAGGTTACAAAATTGATCCAAACAGAGAAGTTCTATCCTTAGGCATAATGAACATAATTGGATCTTTCACTTCTTGCTACGTTGGATCAGGTTCTATTGCACGTACTGCTGTAAATTATAATGCTGGCTCTCAAACAATGGTGTCAAGCATAGTGATGGCACTCACGGTGTTGCTGTCAATTAAATTTTTGACAGGACTTTTATATTTCACTCCCAAAGCAATGCTAGCAGCAATAATTCTTTCAGCTGTACCAGGACTCATTGACATTAAGAAAGTATATGACATTTGGAAAGTTGATAAATTAGATTTCCTTGCTTGCTCTGGTGCCTTTTTAGGAGTGTTGTTTTTATCTGTTCCAATGGGCCTTGCAATTGGGACTATGATATCATTTGCAAAAATACTTTTGATATCAATTCAACCTAGTATAGCGGTTTTTGGAAGGATTCCAGGAAGTGAGGCATTTGGTGATGTAGAACAATATCCAATGGCGATTAACATGCCTGGAGTTTTGGTTGTCTCTGTAAAATCTGCTTGGCTTTGTTTTACAAATGCAAGTCCTATTAGGGAAAGGATCGAGAGATGGGTGATTGATGGAGAAGATGAAAATAGTAAAGGAGAAAGAAGTATCAAAGTTGTCATTATTGATACATCAAGTCTTGTGAGTATTGACACAGCGGGAATAGCTTCTCTGGTGGAGCTGAATCAAAATCTTACTTTACGTGGAGTCACGTTATCCATCGCTAACCCAAGATGGCAAGTAATTCATAAACTGAGATTGGCTAACTTTGTGAGCGAAATTGGAGGAAGGGTTTTCCTGTCTGTGGGAGAAGCTATAGATGCAATACTTGCTGCTAAAATGGAAGCTTGA 1953 0.3774 MDLENEKNDIGRDSIALWVLNPPEPPCMLYRILKNLKEAQLGVTLFSLKHQNSPKIVFTFLQALFPIFASFKNYNVHKFKSDVLGGLILAIFAIPQAMANASLANMSPEYGLYTSIVPPLVYALISSSREIVIGPATVDSLLLSSMIQTLKDPIHDSIAYTQLVLTATFFTGVFQVAFGFFRFGFLVDYLSDATMVGFLQAVAIGIVLQQLKGLFGIVNFTSKSDLFSVIKSLWTSYKNKSKWHPCNFIIGFSFLSFILFTRLLGRRKKKLVWLSHIAPILSFIISSAIAYKVNVHELKIEDYKIEVLGPIKGGSLNPNSINQLQLDSNGKYLGPLIKIGLTVAIISTTQCVAVGRLFASLRGYKIDPNREVLSLGIMNIIGSFTSCYVGSGSIARTAVNYNAGSQTMVSSIVMALTVLLSIKFLTGLLYFTPKAMLAAIILSAVPGLIDIKKVYDIWKVDKLDFLACSGAFLGVLFLSVPMGLAIGTMISFAKILLISIQPSIAVFGRIPGSEAFGDVEQYPMAINMPGVLVVSVKSAWLCFTNASPIRERIERWVIDGEDENSKGERSIKVVIIDTSSLVSIDTAGIASLVELNQNLTLRGVTLSIANPRWQVIHKLRLANFVSEIGGRVFLSVGEAIDAILAAKMEA 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02130 650 SUPERFAMILY SpoIIaa-like 528 643 IPR036513 -
Car05g02130 650 PANTHER SULFATE TRANSPORTER 10 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car05g02130 650 CDD STAS_SulP_like_sulfate_transporter 522 634 - -
Car05g02130 650 Pfam Sulfate permease family 79 468 IPR011547 GO:0016021
Car05g02130 650 Pfam STAS domain 522 639 IPR002645 -
Car05g02130 650 Gene3D STAS domain 501 646 IPR036513 -
Car05g02130 650 ProSiteProfiles STAS domain profile. 541 643 IPR002645 -
Car05g02130 650 PANTHER EARLY NODULIN-70 10 649 - -
Car05g02130 650 TIGRFAM sulP: sulfate permease 66 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02130 Car-Chr5 66515790 66519581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02130 18 648 Inorganic Solute Cotransporters AT5G10180 51.101 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02130 K17469 - gmx:100817841 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02130 05 66515790 66519581 Car05g02130 05 66515790 66519581 ECH