Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02125 ATGACTCAGCAGAATGTGTTAGTTTCTGACACCAAATCTGGTGTTACTGTTTTTccaacaacatcacaaaaaccaccaccagcaccTGGAGGAGGCTACATTTCAATTCAAAGAAGATGGGTTCTCAAAGACCTTGAAATCAACGGTGGACAAAGAATCAATGCTTGGCTTGAATCTATGAGAGCTTCTTCCCCAACTCATCTTAAATCCACACCTTCTTTCGCTGAAGAACAAACCTCTTGGATTCTTCACCACCCGTCTGCATTAGACATGTTTGATCAAATTATTGAAGCATCAAAGGGTAAACAAATTGTCATGTTTCTTGATTATGATGGTACGCTATCTCCTATTGTTGAAGACCCTGATCGTGCTTTTATGTCAGATTCGATGAGAAAAACAGTTAGAAAACTTGCAAGGTATTTTCCAACTGCTATAGTCACTGGCAGATGCAAAGACAAGGTATACAATTTTGTTCGTTTGGCAGAACTATACTATGCTGGAAGTCATGGTATGGATATTAAAGGCCCAACAAGAAGCTCCAAATACAACAAAGGAAGCAAAGCTCAAGCAGTTCTTTATCAACCTGCTAGTGAATTTCTTCCTATGATAGATGAGGTGTACAAACAATTGGTAGACAAGACAAAATCAACTCCTGGAGCGAAGGTTGAGAACAATAAGTTCTGTGTTTCTGTCCATTTTCGCTGCGTTGATGAAAAGGTGCTAGAGATTCGTCCTACTATTAAATGGGACAAAGGAAAAGCCCTTGAATTTTTATTAGAGTCACTTGGATTGGGTAACTGCAGTGATGTATTTCCTATTTATATTGGCGATGATCGATCGGATGAAGATGCATTTAAGAAATTAAGAGACAGAGGACAAGGTTTTGGCATTCTTGTATCAAAATTTGCAAAAGACACAAATGCATCTTACTCTTTACAAGAACCCAATGAGGTGATGAAATTTCTTCAACGCTTGGTGGAGTGGAAACATTTAACTCCGCAACCATGTTCTCGTGTATAA 1020 0.3725 MTQQNVLVSDTKSGVTVFPTTSQKPPPAPGGGYISIQRRWVLKDLEINGGQRINAWLESMRASSPTHLKSTPSFAEEQTSWILHHPSALDMFDQIIEASKGKQIVMFLDYDGTLSPIVEDPDRAFMSDSMRKTVRKLARYFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRSSKYNKGSKAQAVLYQPASEFLPMIDEVYKQLVDKTKSTPGAKVENNKFCVSVHFRCVDEKVLEIRPTIKWDKGKALEFLLESLGLGNCSDVFPIYIGDDRSDEDAFKKLRDRGQGFGILVSKFAKDTNASYSLQEPNEVMKFLQRLVEWKHLTPQPCSRV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02125 339 SUPERFAMILY HAD-like 105 328 IPR036412 -
Car05g02125 339 Gene3D - 208 334 IPR023214 -
Car05g02125 339 Gene3D - 104 207 IPR023214 -
Car05g02125 339 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 239 333 - -
Car05g02125 339 CDD HAD_TPP 105 320 - -
Car05g02125 339 Pfam Trehalose-phosphatase 107 239 IPR003337 GO:0003824|GO:0005992
Car05g02125 339 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 239 IPR044651 GO:0004805|GO:0005992
Car05g02125 339 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 239 - -
Car05g02125 339 TIGRFAM T6PP: trehalose-phosphatase 102 236 IPR003337 GO:0003824|GO:0005992
Car05g02125 339 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 239 333 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02125 Car-Chr5 66466485 66469667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02125 100 325 Trehalose Biosynthesis Gene Families AT1G70290 24.535 6.00e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02125 K01087 - gmx:100815357 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02125 05 66466485 66469667 Car05g02125 05 66466485 66469667 ECH