Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02113 ATGTGCGGGATCTTAGCAGTGTTTGGTTGCGTCGACAACTCTCAGGCGAAACGCGCTCGAATTGTCGAATTGTCTCGCAGGTTGCGACATAGAGGCCCTGATTGGAGTGGTTTGCATTGTCATCAAGATTCTTACCTTTCTCACCAACGTCTTGCCATTATCGACCCTACTTCTGGAGATCAACCTCTTTACAACGAAGACAAGACCGTTTTTGTCACTGTCAATGGGGAGATATACAACCACATGCTATTGCGAAAGAAACTGACTTCCCATCAATTTCGAACTGGCAGTGATTGTGAAGTGCTTGCTCATCTTTATGAAGAACATGGTGAAGAGTTTGTTGATATGCTGGATGGAATGTTCTCCTTTGTGCTTCTTGACACTAAAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGTTGGGGCCATGATGGATCAATATGGTTTGCATCTGAAATGAAAGCTCTGATTGACGATTGTGAGAGATTCATATCTTTTCCTCCAGGGCACATATATTCCAGCAAACAAGGAGGACTAAGAAGGTGGTACAATCCACCATGGTTCTCGGAGCAAATTCCATCAACACCCTATGATCCAATAGTTCTGCGTGAGGCCTTTGAGCGGGCTGTAGTTAAAAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCGGGAGGACTGGATTCATCACTTGTTGCTGCGGTGGCCAACCGGTATTTGGCTGAATCTGGTGCTGCTCAACAGTGGGGATCACAGTTACATACTTTCTGCATTGGTTTAAAGGGCTCTCCGGATTTGAAAGCTGCAAAAGAGGTAGCTGATTATCTTGGCACTCTTCACCACGAACTTCATTTCACAGTTCAGGAAGGTATAGATGCACTTGAGGAAGTCATTTACCATGTTGAAACCTACGATGTAACAACTATCAGAGCAAGTACTCCAATGTTTCTCATGTCCAGAAAAATCAAGTCATTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCACAAGGCACCTAACAAGCAAGAGTTGCATGAAGAAACATGCCGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACCTCAGCTTGGGGTATTGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACACAGCAATGGCTATGGATCCTGAGTGGAAAATGATACGGCCTGATCTTGGAAGGATTGAGAAATGGGTATTGCGTAATGCATTTGATGATGACAAGAATCCATATTTGCCAAAGCACATATTGTACAGGCAAAAGGAACAGTTCAGTGACGGTGTCGGATACAGTTGGATTGATGGTTTGAAGGAGCATGCTAGCGGACAAGTCACAGATGCAATGCTGAAACATGCTAACTTTGTTTACACTGATAACACTCCTACCACAAAAGAGGGATACCACTACAGGACAATTTTTGAGAAGTTATTTCCAAAGAGTGCTGCTAGGTTAACAGTTCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCTAAAGCTGTGGAATGGGATGCAGCATGGTCCAAGAATCTCGATCCTTCTGGTCGTGCCGCGCTTGGTGTTCATGCAGATGCATACAAGGATTCGGCAGATACCAAAATAGCCAAGCCCGAAAATGGATCCCTCTAA 1713 0.4361 MCGILAVFGCVDNSQAKRARIVELSRRLRHRGPDWSGLHCHQDSYLSHQRLAIIDPTSGDQPLYNEDKTVFVTVNGEIYNHMLLRKKLTSHQFRTGSDCEVLAHLYEEHGEEFVDMLDGMFSFVLLDTKDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKALIDDCERFISFPPGHIYSSKQGGLRRWYNPPWFSEQIPSTPYDPIVLREAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAESGAAQQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTLHHELHFTVQEGIDALEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKQELHEETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMAMDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKEHASGQVTDAMLKHANFVYTDNTPTTKEGYHYRTIFEKLFPKSAARLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHADAYKDSADTKIAKPENGSL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02113 570 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Car05g02113 570 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 210 483 - -
Car05g02113 570 PANTHER ASPARAGINE SYNTHETASE 1 566 - -
Car05g02113 570 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Car05g02113 570 PIRSF Asn_synthetase_glu-h 1 359 IPR006426 GO:0004066|GO:0006529
Car05g02113 570 PIRSF Asn_synthetase_glu-h 357 517 IPR006426 GO:0004066|GO:0006529
Car05g02113 570 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Car05g02113 570 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Car05g02113 570 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Car05g02113 570 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 566 - -
Car05g02113 570 Gene3D HUPs 195 513 IPR014729 -
Car05g02113 570 CDD AsnB 2 192 IPR033738 -
Car05g02113 570 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02113 Car-Chr5 66328000 66332917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02113 69 259 PRT Gene Family AT2G16570 30.841 7.39e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02113 K01953 - gmx:732660 1058.9